RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 LIN37Q96GY3 246 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-221ENST00000583080 TBATAQ96M53 351 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 MAGEB5Q9BZ81 275 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 FOXP3Q9BZS1 431 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 SLC13A1Q9BZW2 595 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 PDCL3Q9H2J4 239 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 EPB41L5Q9HCM4 733 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.38■□□□□ 0.21
SREBF1-221ENST00000583080 PPARGC1AQ9UBK2 798 aaKnown RBP16.38■□□□□ 0.21
SREBF1-221ENST00000583080 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 TMEM59LQ9UK28 342 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 LRP4O75096 1905 aa16.38■□□□□ 0.21
SREBF1-221ENST00000583080 D6RAR5 112 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 ARHGAP6O43182 974 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 GADD45BO75293 160 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-221ENST00000583080 CYP11B1P15538 503 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 SLC5A2P31639 672 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 EIF4A3P38919 411 aaKnown RBP16.37■□□□□ 0.21
SREBF1-221ENST00000583080 ATP11AP98196 1134 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 NFATC3Q12968 1075 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 IRF4Q15306 451 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 TGIF1Q15583 401 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 LINC00303Q3SY05 128 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 ESRP1Q6NXG1 681 aaKnown RBP16.37■□□□□ 0.21
SREBF1-221ENST00000583080 PLPP6Q8IY26 295 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 SDR16C5Q8N3Y7 309 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 ARL10Q8N8L6 244 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 EPAS1Q99814 870 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 WRAP53Q9BUR4 548 aaKnown RBP16.37■□□□□ 0.21
SREBF1-221ENST00000583080 METTL5Q9NRN9 209 aaKnown RBP16.37■□□□□ 0.21
SREBF1-221ENST00000583080 GULP1Q9UBP9 304 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 DNAI1Q9UI46 699 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 SCN8AQ9UQD0 1980 aa16.37■□□□□ 0.21
SREBF1-221ENST00000583080 A0A1W2PQM1 296 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 FAM72CH0Y354 149 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 NOBOXO60393 691 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 TM7SF2O76062 418 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 UGT1A5P35504 534 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 MTIF2P46199 727 aaKnown RBP16.36■□□□□ 0.21
SREBF1-221ENST00000583080 SNRPD1P62314 119 aaKnown RBP16.36■□□□□ 0.21
SREBF1-221ENST00000583080 YPEL5P62699 121 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 CCL7P80098 99 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 NFKB2Q00653 900 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 PPARDQ03181 441 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 RAPGEF1Q13905 1077 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 POLD3Q15054 466 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-221ENST00000583080 CDO1Q16878 200 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 ALG11Q2TAA5 492 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 MYLK3Q32MK0 819 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 FAM72AQ5TYM5 149 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 KCTD16Q68DU8 428 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 FAM72DQ6L9T8 149 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 RWDD4Q6NW29 188 aaKnown RBP16.36■□□□□ 0.21
SREBF1-221ENST00000583080 FAM72BQ86X60 149 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 JAMLQ86YT9 394 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 HID1Q8IV36 788 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 FBXO39Q8N4B4 442 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 CXorf40AQ8TE69 158 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 ARHGEF26Q96DR7 871 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 OSBPL1AQ9BXW6 950 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 COQ6Q9Y2Z9 468 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
SREBF1-221ENST00000583080 LRRK1Q38SD2 2015 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 PTPN13Q12923 2485 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 CXorf51AA0A1B0GTR3 108 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 AGRPO00253 132 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 TMCC1O94876 653 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 POP4O95707 220 aaKnown RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 RPLP0P05388 317 aaKnown RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 ETFBP38117 255 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 MAPKAPK2P49137 400 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 C15orf59Q2T9L4 293 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 GDPD4Q6W3E5 623 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 RAB11FIP2Q7L804 512 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 TTC7BQ86TV6 843 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 NOP9Q86U38 636 aaKnown RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 FSTL5Q8N475 847 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 CPA5Q8WXQ8 436 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 TSACCQ96A04 125 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 GFM1Q96RP9 751 aaKnown RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 CPEB1Q9BZB8 566 aaKnown RBP16.35■□□□□ 0.21
SREBF1-221ENST00000583080 TMEM248Q9NWD8 314 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 OR12D3Q9UGF7 316 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 DOLKQ9UPQ8 538 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 PCDHGA7Q9Y5G6 932 aa16.35■□□□□ 0.21
SREBF1-221ENST00000583080 BOD1L1Q8NFC6 3051 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 RAMP2O60895 175 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 LRIG2O94898 1065 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 RHOQP17081 205 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 ADRA1BP35368 520 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 HK3P52790 923 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 GEMIN4P57678 1058 aaKnown RBP16.34■□□□□ 0.21
SREBF1-221ENST00000583080 BPIFB4P59827 614 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 NOMO3P69849 1222 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 NRG1Q02297 640 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-221ENST00000583080 NAA35Q5VZE5 725 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 SMYD5Q6GMV2 418 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 PHLDB2Q86SQ0 1253 aa16.34■□□□□ 0.21
SREBF1-221ENST00000583080 EXTL1Q92935 676 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms