RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PPARGC1AQ9UBK2 798 aaKnown RBP13.77□□□□□ -0.21
SS18-222ENST00000582792 PNMA8BQ9ULN7 279 aaPredicted RBP13.77□□□□□ -0.21
SS18-222ENST00000582792 SPTA1P02549 2419 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 CYSRT1A8MQ03 144 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 NTN3O00634 580 aaPredicted RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 AREL1O15033 823 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 YY2O15391 372 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 SLC28A2O43868 658 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 PNMA6AP0CW24 399 aaPredicted RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 CDK11BP21127 795 aaKnown RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 IGFALSP35858 605 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 FLT3P36888 993 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 ACVRL1P37023 503 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 ETFBP38117 255 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 BPIFB4P59827 614 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 YPEL5P62699 121 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 KCNC4Q03721 635 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 TRNP1Q6NT89 227 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 ESRP1Q6NXG1 681 aaKnown RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 FAM131BQ86XD5 332 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 RYBPQ8N488 228 aaPredicted RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 OR6K2Q8NGY2 324 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 VOPP1Q96AW1 172 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 ARHGEF26Q96DR7 871 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 LIN37Q96GY3 246 aaPredicted RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 CCNL2Q96S94 520 aaPredicted RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 OSBPL1AQ9BXW6 950 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 SLC13A1Q9BZW2 595 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 CLPBQ9H078 707 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
SS18-222ENST00000582792 DNAJC12Q9UKB3 198 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 PADI4Q9UM07 663 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 DAAM1Q9Y4D1 1078 aa13.76□□□□□ -0.21
SS18-222ENST00000582792 CHD5Q8TDI0 1954 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 KRIT1O00522 736 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 TOR1BO14657 336 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 EFSO43281 561 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 WISP1O95388 367 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 GSRP00390 522 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 UGT2B4P06133 528 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 TSHRP16473 764 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 COPB1P53618 953 aaKnown RBP13.75□□□□□ -0.21
SS18-222ENST00000582792 GEMIN4P57678 1058 aaKnown RBP13.75□□□□□ -0.21
SS18-222ENST00000582792 POLD3Q15054 466 aaPredicted RBP13.75□□□□□ -0.21
SS18-222ENST00000582792 MACC1Q6ZN28 852 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 APTXQ7Z2E3 356 aaKnown RBP13.75□□□□□ -0.21
SS18-222ENST00000582792 VPS36Q86VN1 386 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 OR2AP1Q8NGE2 309 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 ARHGEF2Q92974 986 aaKnown RBP13.75□□□□□ -0.21
SS18-222ENST00000582792 CFAP57Q96MR6 1250 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 KLHL32Q96NJ5 620 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 PDCL3Q9H2J4 239 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 SYNDIG1Q9H7V2 258 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 TAB2Q9NYJ8 693 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 ATXN7L1Q9ULK2 861 aaPredicted RBP13.75□□□□□ -0.21
SS18-222ENST00000582792 PCDHGA7Q9Y5G6 932 aa13.75□□□□□ -0.21
SS18-222ENST00000582792 LGALS16A8MUM7 142 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 GOLGA6L19H0YKK7 550 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 PLD2O14939 933 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 POP4O95707 220 aaKnown RBP13.74□□□□□ -0.21
SS18-222ENST00000582792 KRT10P13645 584 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 EIF4A3P38919 411 aaKnown RBP13.74□□□□□ -0.21
SS18-222ENST00000582792 MAPKAPK2P49137 400 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 SNRPD1P62314 119 aaKnown RBP13.74□□□□□ -0.21
SS18-222ENST00000582792 NRG1Q02297 640 aaPredicted RBP13.74□□□□□ -0.21
SS18-222ENST00000582792 PPARDQ03181 441 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 EIF3IQ13347 325 aaKnown RBP13.74□□□□□ -0.21
SS18-222ENST00000582792 MYLK3Q32MK0 819 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 FKBP15Q5T1M5 1219 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 FAXCQ5TGI0 409 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 MANEALQ5VSG8 457 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 ARCQ7LC44 396 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 ARL10Q8N8L6 244 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 RETREG1Q9H6L5 497 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 NDFIP2Q9NV92 336 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 TMEM59LQ9UK28 342 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 ACSL6Q9UKU0 697 aa13.74□□□□□ -0.21
SS18-222ENST00000582792 GOLGA8SH3BPF8 625 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 MMP20O60882 483 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 TM7SF2O76062 418 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 CELA2BP08218 269 aaPredicted RBP13.73□□□□□ -0.21
SS18-222ENST00000582792 CYP11B1P15538 503 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 RHOQP17081 205 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 SLC5A2P31639 672 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 BLKP51451 505 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 ELOCQ15369 112 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 FILIP1LQ4L180 1135 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 C2CD6Q53TS8 623 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 LRRC73Q5JTD7 316 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 GDPD4Q6W3E5 623 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 PRICKLE2Q7Z3G6 844 aa13.73□□□□□ -0.21
SS18-222ENST00000582792 B3GNT8Q7Z7M8 397 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms