RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 PRPSAP1Q14558 356 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 ELAVL3Q14576 367 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 KCNJ11Q14654 390 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 RNASEH2BQ5TBB1 312 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 IZUMO3Q5VZ72 239 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 CWF19L1Q69YN2 538 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 KDELC2Q7Z4H8 507 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 FLCNQ8NFG4 579 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 OR2T3Q8NH03 318 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 GRIN3AQ8TCU5 1115 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 SEC14L1Q92503 715 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 SNF8Q96H20 258 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 MRGPRX2Q96LB1 330 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 TUBGCP5Q96RT8 1024 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 TRIB3Q96RU7 358 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 RAB17Q9H0T7 212 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 RSPH9Q9H1X1 276 aaPredicted RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 EPC1Q9H2F5 836 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 DPH5Q9H2P9 285 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 CHRDQ9H2X0 955 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 MFSD1Q9H3U5 465 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 ATP13A3Q9H7F0 1226 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 VPS45Q9NRW7 570 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 GRHL1Q9NZI5 618 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 IL36AQ9UHA7 158 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 PPM1HQ9ULR3 514 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 TPX2Q9ULW0 747 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 CHKBQ9Y259 395 aa9.63□□□□□ -0.87
RFFL-210ENST00000582308 AAR2Q9Y312 384 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 UTP11Q9Y3A2 253 aaKnown RBP9.63□□□□□ -0.87
RFFL-210ENST00000582308 LOC285095A0A1B0GVY8 99 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 ESYT3A0FGR9 886 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 ERI2A8K979 691 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 E7EVH7 732 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PSMD3O43242 534 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 FZD6O60353 706 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 SOCS5O75159 536 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 USP12O75317 370 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 TMEM63AO94886 807 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 SUN1O94901 812 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PGLSO95336 258 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 AP2A1O95782 977 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 AGTP01019 485 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PRNPP04156 253 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PDHA1P08559 390 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 C7P10643 843 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 GRIA1P42261 906 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 RPS9P46781 194 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 METAP1P53582 386 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 COPAP53621 1224 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 ITGA8P53708 1063 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 RPS14P62263 151 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 BCL2L1Q07817 233 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 NAA30Q147X3 362 aaPredicted RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 GRM3Q14832 879 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 STARD3Q14849 445 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 CRY1Q16526 586 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PCSK7Q16549 785 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 POM121L1PQ3SYA9 428 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 DENND5AQ6IQ26 1287 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 CCDC70Q6NSX1 233 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 HIBCHQ6NVY1 386 aaPredicted RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 RANBP10Q6VN20 620 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 GDPD4Q6W3E5 623 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 SYT13Q7L8C5 426 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 ZSWIM9Q86XI8 627 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 MMAAQ8IVH4 418 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 PPIL6Q8IXY8 311 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 NAT8LQ8N9F0 302 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 TMIEQ8NEW7 156 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 IPMKQ8NFU5 416 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PRCCQ92733 491 aaPredicted RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 ECHDC3Q96DC8 303 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 LRIG1Q96JA1 1093 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 FEM1CQ96JP0 617 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 ZNF641Q96N77 438 aaPredicted RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 KLHL32Q96NJ5 620 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 PPP1R2P1Q96PQ5 205 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 TBL1YQ9BQ87 522 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 APOL2Q9BQE5 337 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 FICDQ9BVA6 458 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 TDRD1Q9BXT4 1180 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 OSBPL1AQ9BXW6 950 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 MKRN2Q9H000 416 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 SLC6A17Q9H1V8 727 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 ANKZF1Q9H8Y5 726 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 LRRC40Q9H9A6 602 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 EIF2B3Q9NR50 452 aaKnown RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 DLGAP2Q9P1A6 1054 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 WHRNQ9P202 907 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.62□□□□□ -0.87
RFFL-210ENST00000582308 ANAPC5Q9UJX4 755 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 V9GYY5 206 aaPredicted RBP9.62□□□□□ -0.87
RFFL-210ENST00000582308 CEP192Q8TEP8 1941 aa9.62□□□□□ -0.87
RFFL-210ENST00000582308 SCN8AQ9UQD0 1980 aa9.61□□□□□ -0.87
RFFL-210ENST00000582308 GOLGA6CA6NDK9 693 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms