RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.58□□□□□ -0.24
TRAF4-214ENST00000580073 RAI2Q9Y5P3 530 aa13.58□□□□□ -0.24
TRAF4-214ENST00000580073 KIF26BQ2KJY2 2108 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 GOLGA8SH3BPF8 625 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 ENDOD1O94919 500 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 PAK4O96013 591 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-214ENST00000580073 TPM3P06753 285 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 HNRNPH3P31942 346 aaKnown RBP13.57□□□□□ -0.24
TRAF4-214ENST00000580073 FLT3P36888 993 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 BLKP51451 505 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 YPEL5P62699 121 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 ARF5P84085 180 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 CFHR1Q03591 330 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 ISXQ2M1V0 245 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 C3orf38Q5JPI3 329 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 PHLDB2Q86SQ0 1253 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 FAM131BQ86XD5 332 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 ARL14Q8N4G2 192 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 OR2AP1Q8NGE2 309 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 CXorf40AQ8TE69 158 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 CASKIN2Q8WXE0 1202 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 SYN2Q92777 582 aaPredicted RBP13.57□□□□□ -0.24
TRAF4-214ENST00000580073 BMFQ96LC9 184 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 CFAP57Q96MR6 1250 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 DNAJC7Q99615 494 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 ANP32EQ9BTT0 268 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 SLC13A1Q9BZW2 595 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 TM6SF2Q9BZW4 377 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 MAGEH1Q9H213 219 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 APOBEC3BQ9UH17 382 aaKnown RBP13.57□□□□□ -0.24
TRAF4-214ENST00000580073 FCF1Q9Y324 198 aaKnown RBP13.57□□□□□ -0.24
TRAF4-214ENST00000580073 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 SCN8AQ9UQD0 1980 aa13.57□□□□□ -0.24
TRAF4-214ENST00000580073 EME2A4GXA9 379 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 POM121BA6NF01 834 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 RAMP2O60895 175 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 MFAP3LO75121 409 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ZMPSTE24O75844 475 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 C1QL1O75973 258 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 GJB6O95452 261 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 IGSF6O95976 241 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 PRB1P04280 392 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ANXA6P08133 673 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 GIMD1P0DJR0 217 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 RHOQP17081 205 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 TFE3P19532 575 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 MMP8P22894 467 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 SUOXP51687 545 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 KLHL30Q0D2K2 578 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 CDKN3Q16667 212 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ZNF542PQ5EBM4 170 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 TRNP1Q6NT89 227 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 RWDD4Q6NW29 188 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ESRP1Q6NXG1 681 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 EFL1Q7Z2Z2 1120 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 BNIPLQ7Z465 357 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ATL2Q8NHH9 583 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 LMX1AQ8TE12 382 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 SCG3Q8WXD2 468 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ARHGEF2Q92974 986 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 TBC1D31Q96DN5 1066 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 CHP1Q99653 195 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 C1QTNF2Q9BXJ5 285 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ANLNQ9NQW6 1124 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 METTL5Q9NRN9 209 aaKnown RBP13.56□□□□□ -0.24
TRAF4-214ENST00000580073 TMEM248Q9NWD8 314 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 ZNF212Q9UDV6 495 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 OR12D3Q9UGF7 316 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 NENFQ9UMX5 172 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 DOLKQ9UPQ8 538 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 SATB2Q9UPW6 733 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 SNX10Q9Y5X0 201 aa13.56□□□□□ -0.24
TRAF4-214ENST00000580073 TCRBV5S1A1TA0A578 114 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 CPED1A4D0V7 1026 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 C16orf96A6NNT2 1141 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 TMX2-CTNND1H3BSU7 103 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 I6L893 689 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 KRIT1O00522 736 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 KLK10O43240 276 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 ZNF821O75541 412 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 NEBLO76041 1014 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 TM7SF2O76062 418 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 POP4O95707 220 aaKnown RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 ALPIP09923 528 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 TNFAIP3P21580 790 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 XPAP23025 273 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 HTR1BP28222 390 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 PFN3P60673 137 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 EIF3IQ13347 325 aaKnown RBP13.55□□□□□ -0.24
TRAF4-214ENST00000580073 SPIDRQ14159 915 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 FGL2Q14314 439 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 GRM3Q14832 879 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 DEFB133Q30KQ1 61 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 C6orf132Q5T0Z8 1188 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 TRIM72Q6ZMU5 477 aa13.55□□□□□ -0.24
TRAF4-214ENST00000580073 MACC1Q6ZN28 852 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms