RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	AASDHPPT	Q9NRN7	309 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ETNK2	Q9NVF9	386 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SNX11	Q9Y5W9	270 aa		13.82	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZZEF1	O43149	2961 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZNF487	B1APH4	448 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TLR4	O00206	839 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	WNT9A	O14904	365 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MAGEC1	O60732	1142 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PCDH8	O95206	1070 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	WNT1	P04628	370 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CD48	P09326	243 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MAT2A	P31153	395 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SLC1A1	P43005	524 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MAGEA1	P43355	309 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RENBP	P51606	427 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	HADHB	P55084	474 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	C21orf59	P57076	290 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	STAT4	Q14765	748 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ATP13A4	Q4VNC1	1196 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LRRC38	Q5VT99	294 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ARHGAP36	Q6ZRI8	547 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	VSIG1	Q86XK7	387 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CPNE8	Q86YQ8	564 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TP53INP2	Q8IXH6	220 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TMEM145	Q8NBT3	493 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FAF2	Q96CS3	445 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	KLHL32	Q96NJ5	620 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PSKH2	Q96QS6	385 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CINP	Q9BW66	212 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ERVMER34-1	Q9H9K5	563 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	IL21R	Q9HBE5	538 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SEPT3	Q9UH03	358 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ZFR2	Q9UPR6	939 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ADAMTS9	Q9P2N4	1935 aa		13.81	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SPAAR	A0A1B0GVQ0	90 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TSPAN11	A1L157	253 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	AREL1	O15033	823 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	INSIG1	O15503	277 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MAFK	O60675	156 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PEX11B	O96011	259 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CAPNS1	P04632	268 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	HNRNPA2B1	P22626	353 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CYLC1	P35663	651 aa	Predicted RBP	13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	HSPA9	P38646	679 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	MMRN1	Q13201	1228 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PAFAH1B3	Q15102	231 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SPA17	Q15506	151 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ANKRD20A8P	Q5CZ79	823 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	C19orf48	Q6RUI8	117 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LAYN	Q6UX15	382 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TTC7B	Q86TV6	843 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TMTC1	Q8IUR5	882 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NETO2	Q8NC67	525 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TSEN2	Q8NCE0	465 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PCDH19	Q8TAB3	1148 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FAM174A	Q8TBP5	190 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ASB12	Q8WXK4	309 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	EXOC2	Q96KP1	924 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CALN1	Q9BXU9	219 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SUV39H2	Q9H5I1	410 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LUC7L	Q9NQ29	371 aa	Known RBP	13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TM7SF3	Q9NS93	570 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PLXNA2	O75051	1894 aa		13.8	□□□□□ -0.2
CSNK1D-208	ENST00000578501		A0A0A6YYK5	440 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SLC31A1	O15431	190 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PCDHGA12	O60330	932 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TIMP2	P16035	220 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	AKT2	P31751	481 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ABL2	P42684	1182 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NXPH1	P58417	271 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GALNT2	Q10471	571 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LBR	Q14739	615 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SUZ12	Q15022	739 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SEL1L3	Q68CR1	1132 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NCBP2-AS2	Q69YL0	99 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	BRAT1	Q6PJG6	821 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SRL	Q86TD4	932 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	CHCHD4	Q8N4Q1	142 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	OXR1	Q8N573	874 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ATPAF2	Q8N5M1	289 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	RAPGEF5	Q92565	580 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FATE1	Q969F0	183 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	LENG8	Q96PV6	779 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SLC17A9	Q9BYT1	436 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ATP13A3	Q9H7F0	1226 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	GDF3	Q9NR23	364 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	PCDHA13	Q9Y5I0	950 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	HS3ST3A1	Q9Y663	406 aa		13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ASCC3	Q8N3C0	2202 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-208	ENST00000578501	ADAMTS20	P59510	1910 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501		A0A1B0GTQ1	180 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	TMEM110-MUSTN1	A8MSY1	372 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501		H0Y8X5	98 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	NEMP1	O14524	444 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	YKT6	O15498	198 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	FLRT2	O43155	660 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SPINT1	O43278	529 aa		13.78	□□□□□ -0.2
CSNK1D-208	ENST00000578501	SH3BP5	O60239	455 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms