RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ZNF621Q6ZSS3 439 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 LPGAT1Q92604 370 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 RRN3Q9NYV6 651 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TRPM5Q9NZQ8 1165 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 VPS9D1Q9Y2B5 631 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 VWA7Q9Y334 891 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 TRAF6Q9Y4K3 522 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 PCDHB5Q9Y5E4 795 aa12.14□□□□□ -0.47
ERBB2-206ENST00000578373 A0A087WXM4 84 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 HNRNPCL2B2RXH8 293 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 TRIM38O00635 465 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PAGE1O75459 146 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 GRM5P41594 1212 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 RFX3P48380 749 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 GPR158Q5T848 1215 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 SYPL2Q5VXT5 272 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 RHBDF2Q6PJF5 856 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CUZD1Q86UP6 607 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 RALGPS2Q86X27 583 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 LZTR1Q8N653 840 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PHF12Q96QT6 1004 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PCDHAC1Q9H158 963 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PRKAG3Q9UGI9 489 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 POLG2Q9UHN1 485 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 YJEFN3A6XGL0 299 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ARIH2O95376 493 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CCNFP41002 786 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 IDH3AP50213 366 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 RAD23AP54725 363 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 POU5F1Q01860 360 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PSMD5Q16401 504 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 VPS26BQ4G0F5 336 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PPM1LQ5SGD2 360 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ZNF280DQ6N043 979 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 UGT3A1Q6NUS8 523 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 SPPL2CQ8IUH8 684 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ZCCHC7Q8N3Z6 543 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CLHC1Q8NHS4 586 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CD101Q93033 1021 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PRR11Q96HE9 360 aaPredicted RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ZFRQ96KR1 1074 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PPM1MQ96MI6 270 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CIPCQ9C0C6 399 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 POLR1EQ9GZS1 481 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CATSPERZQ9NTU4 200 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ANAPC2Q9UJX6 822 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 F8W810 466 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 WFS1O76024 890 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ALDH1A1P00352 501 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 WNT7BP56706 349 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 MBTD1Q05BQ5 628 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 STARD3Q14849 445 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 POM121L1PQ3SYA9 428 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 RAB6CQ53S08 254 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 CAMK1DQ8IU85 385 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 SEC14L1Q92503 715 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 MED8Q96G25 268 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 FBXL18Q96ME1 805 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 MRPL57Q9BQC6 102 aaKnown RBP12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ADGRE3Q9BY15 652 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 RAB6CQ9H0N0 254 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 COMMD8Q9NX08 183 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 PSMD13Q9UNM6 376 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 IPPQ9Y573 584 aa12.13□□□□□ -0.47
ERBB2-206ENST00000578373 ALDH2P05091 517 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 RUNX1T1Q06455 604 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 SLC9B1Q4ZJI4 515 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 RPS27LQ71UM5 84 aaKnown RBP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 SATL1Q86VE3 508 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 FSTL5Q8N475 847 aaPredicted RBP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 ATAD1Q8NBU5 361 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 OR56A4Q8NGH8 313 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 MAGED4Q96JG8 741 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 C6orf62Q9GZU0 229 aaPredicted RBP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 TLR8Q9NR97 1041 aaKnown RBP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 DAPK2Q9UIK4 370 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 MGAT4DA6NG13 374 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 C9IYK1 514 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 TSPAN1O60635 241 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 CTPS1P17812 591 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 C21orf59P57076 290 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 GJA9P57773 515 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 TAS2R39P59534 338 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 CPSF6Q16630 551 aaKnown RBP eCLIP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 ANO7Q6IWH7 933 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 GPC2Q8N158 579 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 CMASQ8NFW8 434 aaPredicted RBP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 TBATAQ96M53 351 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 ZMAT2Q96NC0 199 aaKnown RBP12.12□□□□□ -0.47
ERBB2-206ENST00000578373 FIZ1Q96SL8 496 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 ABCC13Q9NSE7 274 aa12.12□□□□□ -0.47
ERBB2-206ENST00000578373 NRCAMQ92823 1304 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms