RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SNIP1Q8TAD8 396 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 CENPTQ96BT3 561 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 CATSPERBQ9H7T0 1116 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 TMEM63CQ9P1W3 806 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 DKK3Q9UBP4 350 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 LHX3Q9UBR4 397 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 IPO11Q9UI26 975 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 MFHAS1Q9Y4C4 1052 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 ANKRD36A6QL64 1941 aa16.85■□□□□ 0.29
CDK5RAP3-206ENST00000578018 INSIG1O15503 277 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 AQP9O43315 295 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 JUNDP17535 347 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 ITPKBP27987 946 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 RAD51Q06609 339 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 EIF2B5Q13144 721 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 ZCCHC8Q6NZY4 707 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 DCUN1D2Q6PH85 259 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 TTC7BQ86TV6 843 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 VPS36Q86VN1 386 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 EXOC2Q96KP1 924 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 PDFQ9HBH1 243 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 TAS2R14Q9NYV8 317 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 PCDHB1Q9Y5F3 818 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 CSNK1G3Q9Y6M4 447 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 LRP4O75096 1905 aa16.84■□□□□ 0.29
CDK5RAP3-206ENST00000578018 BPTFQ12830 3046 aa16.83■□□□□ 0.29
CDK5RAP3-206ENST00000578018 MMP20O60882 483 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CCDC172P0C7W6 258 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TIMP2P16035 220 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ITIH2P19823 946 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 HTR7P34969 479 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DUSP3P51452 185 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TPI1P60174 286 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TYRO3Q06418 890 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CYTH1Q15438 398 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RBFAQ8N0V3 343 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CXorf40AQ8TE69 158 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 BBC3Q96PG8 261 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 WRAP53Q9BUR4 548 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CPEB1Q9BZB8 566 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LRRC19Q9H756 370 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 EVA1BQ9NVM1 165 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 GPATCH2LQ9NWQ4 482 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PNMA8BQ9ULN7 279 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MYO6Q9UM54 1294 aa16.83■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TSPAN11A1L157 253 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TEX33O43247 280 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ATMINO43313 823 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TM7SF2O76062 418 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PIGNO95427 931 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DESP17661 470 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 THOP1P52888 689 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MAMLD1Q13495 774 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DEFB133Q30KQ1 61 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TBC1D25Q3MII6 688 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PHACTR4Q8IZ21 702 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TP53I13Q8NBR0 393 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 IFI44Q8TCB0 444 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LMX1AQ8TE12 382 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 FGF11Q92914 225 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 VCPIP1Q96JH7 1222 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DEPDC7Q96QD5 511 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 C1QTNF7Q9BXJ2 289 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TCEAL2Q9H3H9 227 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MBNL1Q9NR56 388 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 NCKIPSDQ9NZQ3 722 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 UBA2Q9UBT2 640 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 APOBEC3BQ9UH17 382 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 AP4E1Q9UPM8 1137 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SHROOM3Q8TF72 1996 aa16.82■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LRRC53A6NM62 1247 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TPP1O14773 563 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 RRP8O43159 456 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LZTS3O60299 673 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PRAMEF11O60813 436 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CSO75390 466 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PSMA2P25787 234 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ACTN2P35609 894 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 SUOXP51687 545 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 YPEL5P62699 121 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ELP6Q0PNE2 266 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PTK2BQ14289 1009 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 IRF4Q15306 451 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CDKN3Q16667 212 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CA9Q16790 459 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TMEM52BQ4KMG9 183 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PLEKHA7Q6IQ23 1121 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 PPP1R2P3Q6NXS1 205 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 GUSBP11Q6P575 273 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MACC1Q6ZN28 852 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 LRRC69Q6ZNQ3 347 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 DNAAF5Q86Y56 855 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 ARFGAP1Q8N6T3 406 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 MAPK15Q8TD08 544 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 BTN2A2Q8WVV5 523 aa16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 CELF6Q96J87 481 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-206ENST00000578018 TBATAQ96M53 351 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms