RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 GOLGA2P5Q9HBQ8 144 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FBRSL1Q9HCM7 1045 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CATSPERZQ9NTU4 200 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ABHD10Q9NUJ1 306 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ABCB8Q9NUT2 735 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ATAD3AQ9NVI7 634 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM63CQ9P1W3 806 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 POLG2Q9UHN1 485 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 AURKCQ9UQB9 309 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 WNT6Q9Y6F9 365 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 OAS3Q9Y6K5 1087 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A087X0B3 334 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GRID2IPA4D2P6 1211 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 EML1O00423 815 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TLX3O43711 291 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 B4GALT4O60513 344 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TSPAN1O60635 241 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CCDC22O60826 627 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ERAL1O75616 437 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MATN4O95460 622 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ERBB2P04626 1255 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GJA1P17302 382 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 HPCAL1P37235 193 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GNPDA1P46926 289 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PRKAG1P54619 331 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CDK18Q07002 472 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MPP3Q13368 585 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP51A1Q16850 503 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MUM1Q2TAK8 710 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PARP15Q460N3 678 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 C6orf132Q5T0Z8 1188 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CAPN13Q6MZZ7 669 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 AFTPHQ6ULP2 937 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 IFNEQ86WN2 208 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RAB43Q86YS6 212 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC8AQ8IWT6 810 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RBFAQ8N0V3 343 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NKAPQ8N5F7 415 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CCDC197Q8NCU1 140 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MOSPD2Q8NHP6 518 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF563Q8TA94 476 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MAPK15Q8TD08 544 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF398Q8TD17 642 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 HTR3CQ8WXA8 447 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 EXOC2Q96KP1 924 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PRICKLE1Q96MT3 831 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHL32Q96NJ5 620 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GBP5Q96PP8 586 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MAGEH1Q9H213 219 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ACTR5Q9H9F9 607 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP4F12Q9HCS2 524 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PAPOLBQ9NRJ5 636 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MPP6Q9NZW5 540 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ARHGAP28Q9P2N2 729 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF214Q9UL59 606 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CAPN11Q9UMQ6 739 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PHF24Q9UPV7 400 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 E9PCH4 1651 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 APC2O95996 2303 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SOBPA7XYQ1 873 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MCIDASD6RGH6 385 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TM9SF1O15321 606 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LDB2O43679 373 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MAN1A2O60476 641 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ENTPD5O75356 428 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 PEX14O75381 377 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GJB6O95452 261 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 IGHEP01854 428 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 HLA-DQA2P01906 255 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NTSR1P30989 418 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FMO4P31512 558 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC8A1P32418 973 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 BUD31P41223 144 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CD86P42081 329 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 MATKP42679 507 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SSR2P43308 183 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TNFRSF4P43489 277 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 AIF1P55008 147 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 C2orf54Q08AI8 447 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 STX3Q13277 289 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 RUNX3Q13761 415 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LRRC14Q15048 493 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 NR6A1Q15406 480 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM214AQ32MH5 1076 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF792Q3KQV3 632 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CARD16Q5EG05 197 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 UBXN11Q5T124 520 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM109BQ6ICB4 259 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 LVRNQ6Q4G3 990 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC22A9Q8IVM8 553 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 FBXO39Q8N4B4 442 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ARL14Q8N4G2 192 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 TEX19Q8NA77 164 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 OR6K2Q8NGY2 324 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ZDHHC12Q96GR4 267 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CRELD1Q96HD1 420 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 CSPG4P5Q96PW8 444 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 GFM1Q96RP9 751 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 BPIFA3Q9BQP9 254 aa2.95□□□□□ -1.94
SMCHD1-203ENST00000577880 ACAT2Q9BWD1 397 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms