RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PM20D1Q6GTS8 502 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 SNX31Q8N9S9 440 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 ZFP42Q96MM3 310 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 TSGA13Q96PP4 275 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 CYP4F12Q9HCS2 524 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 CACNA2D2Q9NY47 1150 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 SUCOQ9UBS9 1254 aaKnown RBP19.25■□□□□ 0.67
SCARF1-206ENST00000573852 TMCO1Q9UM00 188 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 AAR2Q9Y312 384 aaKnown RBP19.25■□□□□ 0.67
SCARF1-206ENST00000573852 TLL2Q9Y6L7 1015 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 H3BSA7 217 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 ATP5F1P24539 256 aaPredicted RBP19.25■□□□□ 0.67
SCARF1-206ENST00000573852 AXLP30530 894 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 PSMD8P48556 350 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 POLD2P49005 469 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 C1QTNF8P60827 252 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 CDC42EP1Q00587 391 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 PPP1R3AQ16821 1122 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 DDI1Q8WTU0 396 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 LPGAT1Q92604 370 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 SLCO4A1Q96BD0 722 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 UNC93B1Q9H1C4 597 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 CHST12Q9NRB3 414 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 IGSF5Q9NSI5 407 aa19.25■□□□□ 0.67
SCARF1-206ENST00000573852 TMCC1O94876 653 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 FGFR3P22607 806 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 NR1H2P55055 460 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 DNAJB13P59910 316 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 TMEM259Q4ZIN3 620 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 REP15Q6BDI9 236 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 ZNF470Q6ECI4 717 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 RWDD4Q6NW29 188 aaKnown RBP19.24■□□□□ 0.67
SCARF1-206ENST00000573852 GPRC5AQ8NFJ5 357 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 RHOBTB2Q9BYZ6 727 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 MRPL42Q9Y6G3 142 aaKnown RBP19.24■□□□□ 0.67
SCARF1-206ENST00000573852 ZNF236Q9UL36 1845 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 SMIM35A0A1B0GVV1 85 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 PRORSD1PA6NEY8 169 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 HHLA1C9JL84 531 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 TRIM24O15164 1050 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 F9P00740 461 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 LRPAP1P30533 357 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 IKBKEQ14164 716 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 CSHL1Q14406 222 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 PCBP1Q15365 356 aaKnown RBP eCLIP19.24■□□□□ 0.67
SCARF1-206ENST00000573852 CYTH1Q15438 398 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 AGKQ53H12 422 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 RBM20Q5T481 1227 aaKnown RBP19.24■□□□□ 0.67
SCARF1-206ENST00000573852 KDELC2Q7Z4H8 507 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 PPHLN1Q8NEY8 458 aaKnown RBP19.24■□□□□ 0.67
SCARF1-206ENST00000573852 SENP8Q96LD8 212 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 ZNF597Q96LX8 424 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 CCDC167Q9P0B6 97 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 TCAF1Q9Y4C2 921 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 PLXNB2O15031 1838 aa19.24■□□□□ 0.67
SCARF1-206ENST00000573852 SLC5A2P31639 672 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 CD151P48509 253 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 USP46P62068 366 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 RHDQ02161 417 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 STX5Q13190 355 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 FASTKQ14296 549 aaKnown RBP19.23■□□□□ 0.67
SCARF1-206ENST00000573852 DCLRE1AQ6PJP8 1040 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 TAC4Q86UU9 113 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 RNF135Q8IUD6 432 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 C2CD4AQ8NCU7 369 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-206ENST00000573852 ATXN3LQ9H3M9 355 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 GLOD4Q9HC38 313 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 PADI4Q9UM07 663 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 CEPT1Q9Y6K0 416 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 PSMD12O00232 456 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-206ENST00000573852 NELFEP18615 380 aaKnown RBP19.23■□□□□ 0.67
SCARF1-206ENST00000573852 EPHX2P34913 555 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 GJA5P36382 358 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 CHRNA4P43681 627 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 ZNF789Q5FWF6 425 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 CYP2R1Q6VVX0 501 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 ARHGAP12Q8IWW6 846 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 FCRL5Q96RD9 977 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 SLC29A1Q99808 456 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 SIK2Q9H0K1 926 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 TRPV6Q9H1D0 765 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 FBXO5Q9UKT4 447 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 SARDHQ9UL12 918 aa19.23■□□□□ 0.67
SCARF1-206ENST00000573852 A0A087X1B8 175 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 UBDO15205 165 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 RANBP1P43487 201 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 COG7P83436 770 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 BTBD8Q5XKL5 378 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 BORAQ6PGQ7 559 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 PNPLA1Q8N8W4 532 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 GRIN3AQ8TCU5 1115 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 RNF34Q969K3 372 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 ZNF512Q96ME7 567 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-206ENST00000573852 MEAF6Q9HAF1 191 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 NEU3Q9UQ49 428 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 SNX13Q9Y5W8 968 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 HEATR9A2RTY3 570 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 MBLAC1A4D2B0 266 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-206ENST00000573852 BTBD19C9JJ37 291 aa19.22■□□□□ 0.67
SCARF1-206ENST00000573852 HNRNPRO43390 633 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms