RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 ASXL3Q9C0F0 2248 aa17.65■□□□□ 0.42
SMG6-214ENST00000573827 A0A087X0T9 212 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 SRRM3A6NNA2 597 aaPredicted RBP17.64■□□□□ 0.41
SMG6-214ENST00000573827 PRPSAP2O60256 369 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 BUB1BO60566 1050 aaPredicted RBP17.64■□□□□ 0.41
SMG6-214ENST00000573827 LDOC1O95751 146 aaPredicted RBP17.64■□□□□ 0.41
SMG6-214ENST00000573827 IGSF6O95976 241 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 FAM228BP0C875 321 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 DGKAP23743 735 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 PFN3P60673 137 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 FZD2Q14332 565 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 DPYSL2Q16555 572 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 TXNRD3NBQ6F5E7 133 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 DHRS13Q6UX07 377 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 ZSWIM9Q86XI8 627 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 NIPA2Q8N8Q9 360 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 CENPTQ96BT3 561 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 TRIM11Q96F44 468 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 IFT43Q96FT9 208 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 THAP2Q9H0W7 228 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 MYO1AQ9UBC5 1043 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 UBA2Q9UBT2 640 aaPredicted RBP17.64■□□□□ 0.41
SMG6-214ENST00000573827 KLF15Q9UIH9 416 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 BZW2Q9Y6E2 419 aaKnown RBP17.64■□□□□ 0.41
SMG6-214ENST00000573827 CACNA1GO43497 2377 aa17.64■□□□□ 0.41
SMG6-214ENST00000573827 SPTY2D1-AS1A0A0U1RR47 76 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 A6NNZ2 444 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 MUSKO15146 869 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 PIAS2O75928 621 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 RNF8O76064 485 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 PIGNO95427 931 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 PEX11BO96011 259 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 SERPING1P05155 500 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 CYP1A2P05177 515 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 HNRNPH3P31942 346 aaKnown RBP17.63■□□□□ 0.41
SMG6-214ENST00000573827 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
SMG6-214ENST00000573827 DENND6BQ8NEG7 585 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 FAM174AQ8TBP5 190 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 ARHGEF26Q96DR7 871 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 CALN1Q9BXU9 219 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 MRPL47Q9HD33 250 aaKnown RBP17.63■□□□□ 0.41
SMG6-214ENST00000573827 ETNK2Q9NVF9 386 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 IFNKQ9P0W0 207 aa17.63■□□□□ 0.41
SMG6-214ENST00000573827 PNMA8BQ9ULN7 279 aaPredicted RBP17.63■□□□□ 0.41
SMG6-214ENST00000573827 LY6G6EA0A0G2JKS1 128 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 FAM149AA5PLN7 773 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 SIGLEC6O43699 453 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 C1SP09871 688 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 DESP17661 470 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 CSNK1DP48730 415 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 ZNF135P52742 658 aaPredicted RBP17.62■□□□□ 0.41
SMG6-214ENST00000573827 CLDN6P56747 220 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 SLC25A11Q02978 314 aaKnown RBP17.62■□□□□ 0.41
SMG6-214ENST00000573827 ZNF211Q13398 564 aaPredicted RBP17.62■□□□□ 0.41
SMG6-214ENST00000573827 ACAP1Q15027 740 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 TMEM52BQ4KMG9 183 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 TDRD12Q587J7 1177 aaKnown RBP17.62■□□□□ 0.41
SMG6-214ENST00000573827 PPP6R3Q5H9R7 873 aaPredicted RBP17.62■□□□□ 0.41
SMG6-214ENST00000573827 POLNQ7Z5Q5 900 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 PROSER1Q86XN7 944 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 ZNF354CQ86Y25 554 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 TSEN2Q8NCE0 465 aaKnown RBP17.62■□□□□ 0.41
SMG6-214ENST00000573827 HCAR2Q8TDS4 363 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 IQCDQ96DY2 449 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 DONSONQ9NYP3 566 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 U3KQA8 63 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 LRRK1Q38SD2 2015 aa17.62■□□□□ 0.41
SMG6-214ENST00000573827 ARHGAP42A6NI28 874 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 MMP20O60882 483 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 RFPL3O75679 317 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 RARAP10276 462 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 NME1P15531 152 aaKnown RBP17.61■□□□□ 0.41
SMG6-214ENST00000573827 IL4RP24394 825 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 IGFALSP35858 605 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 RABIFP47224 123 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 SMTNL2Q2TAL5 461 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 ZNF542PQ5EBM4 170 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 PTAR1Q7Z6K3 402 aaPredicted RBP17.61■□□□□ 0.41
SMG6-214ENST00000573827 TTC7BQ86TV6 843 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 DCP2Q8IU60 420 aaKnown RBP17.61■□□□□ 0.41
SMG6-214ENST00000573827 GALNT15Q8N3T1 639 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 TP53I13Q8NBR0 393 aaPredicted RBP17.61■□□□□ 0.41
SMG6-214ENST00000573827 OR4C6Q8NH72 309 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 FAM71BQ8TC56 605 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 CPLX3Q8WVH0 158 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 ECHDC3Q96DC8 303 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 BTBD6Q96KE9 485 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 NCAPGQ9BPX3 1015 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 XPO4Q9C0E2 1151 aaKnown RBP17.61■□□□□ 0.41
SMG6-214ENST00000573827 SUV39H2Q9H5I1 410 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 DKK4Q9UBT3 224 aa17.61■□□□□ 0.41
SMG6-214ENST00000573827 LUC7L2Q9Y383 392 aaKnown RBP17.61■□□□□ 0.41
SMG6-214ENST00000573827 ATRXP46100 2492 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 CSF2P04141 144 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 CKMT2P17540 419 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 ACP1P24666 158 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 CASP14P31944 242 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 SUOXP51687 545 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 TPM4P67936 248 aa17.6■□□□□ 0.41
SMG6-214ENST00000573827 RAD51Q06609 339 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms