RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MAXP61244 160 aa16■□□□□ 0.15
CHD3-215ENST00000572750 PPP2CBP62714 309 aa16■□□□□ 0.15
CHD3-215ENST00000572750 PPP2CAP67775 309 aa16■□□□□ 0.15
CHD3-215ENST00000572750 ZNF211Q13398 564 aaPredicted RBP16■□□□□ 0.15
CHD3-215ENST00000572750 TFDP2Q14188 446 aa16■□□□□ 0.15
CHD3-215ENST00000572750 PPP2R5EQ16537 467 aa16■□□□□ 0.15
CHD3-215ENST00000572750 LRRC73Q5JTD7 316 aa16■□□□□ 0.15
CHD3-215ENST00000572750 AADACL2Q6P093 401 aa16■□□□□ 0.15
CHD3-215ENST00000572750 GDPD4Q6W3E5 623 aa16■□□□□ 0.15
CHD3-215ENST00000572750 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
CHD3-215ENST00000572750 ERN2Q76MJ5 926 aaKnown RBP16■□□□□ 0.15
CHD3-215ENST00000572750 LRRC49Q8IUZ0 686 aa16■□□□□ 0.15
CHD3-215ENST00000572750 RGL4Q8IZJ4 473 aa16■□□□□ 0.15
CHD3-215ENST00000572750 OR2T34Q8NGX1 318 aa16■□□□□ 0.15
CHD3-215ENST00000572750 NSMCE1Q8WV22 266 aa16■□□□□ 0.15
CHD3-215ENST00000572750 FOXJ1Q92949 421 aa16■□□□□ 0.15
CHD3-215ENST00000572750 BIRC7Q96CA5 298 aa16■□□□□ 0.15
CHD3-215ENST00000572750 LRIG1Q96JA1 1093 aa16■□□□□ 0.15
CHD3-215ENST00000572750 OSBPL1AQ9BXW6 950 aa16■□□□□ 0.15
CHD3-215ENST00000572750 HDAC8Q9BY41 377 aa16■□□□□ 0.15
CHD3-215ENST00000572750 NT5MQ9NPB1 228 aa16■□□□□ 0.15
CHD3-215ENST00000572750 ZBTB32Q9Y2Y4 487 aaPredicted RBP16■□□□□ 0.15
CHD3-215ENST00000572750 SLCO1B1Q9Y6L6 691 aa16■□□□□ 0.15
CHD3-215ENST00000572750 GON4LQ3T8J9 2241 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 METTL12A8MUP2 240 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 MIF4GDA9UHW6 222 aaKnown RBP15.99■□□□□ 0.15
CHD3-215ENST00000572750 C1QTNF9BB2RNN3 333 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 PATE3B3GLJ2 98 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 KCNK1O00180 336 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 TM4SF5O14894 197 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 DDX3YO15523 660 aaKnown RBP15.99■□□□□ 0.15
CHD3-215ENST00000572750 C1QTNF9P0C862 333 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 PYGMP11217 842 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 ADRB3P13945 408 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 TGM2P21980 687 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 ABL2P42684 1182 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 SCNN1BP51168 640 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 RAD51Q06609 339 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 PPIDQ08752 370 aaKnown RBP15.99■□□□□ 0.15
CHD3-215ENST00000572750 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
CHD3-215ENST00000572750 ZNF805Q5CZA5 627 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 PLA2G2CQ5R387 149 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 FAM182AQ5T1J6 154 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 MARC1Q5VT66 337 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 KIAA0895LQ68EN5 471 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 TIGD7Q6NT04 549 aaPredicted RBP15.99■□□□□ 0.15
CHD3-215ENST00000572750 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 SRLQ86TD4 932 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 SYT12Q8IV01 421 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 CCDC13Q8IYE1 715 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 ZCCHC9Q8N567 271 aaKnown RBP15.99■□□□□ 0.15
CHD3-215ENST00000572750 UBL4BQ8N7F7 174 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 MAML1Q92585 1016 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 NSMCE3Q96MG7 304 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 TSGA13Q96PP4 275 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 MGME1Q9BQP7 344 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 MIR1-1HGQ9H1L0 117 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 PCED1AQ9H1Q7 454 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 SEMA4GQ9NTN9 838 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 PILRBQ9UKJ0 227 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 ITM2BQ9Y287 266 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 TTLL3Q9Y4R7 772 aa15.99■□□□□ 0.15
CHD3-215ENST00000572750 HELZ2Q9BYK8 2649 aaKnown RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3DA0A087WVF3 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3IA0A087WXS9 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3EA0A087X179 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3KA0A087X1G2 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3FA6NER0 549 aaPredicted RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 C16orf96A6NNT2 1141 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3LB9A6J9 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 PPP1R12AO14974 1030 aaPredicted RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 MATN3O15232 486 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 HLA-DQB2P05538 268 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3HP0C7X1 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 CCNCP24863 283 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 HSPA9P38646 679 aaKnown RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 RENBPP51606 427 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 AP1B1Q10567 949 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 ZBTB17Q13105 803 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 PDK1Q15118 436 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 WDR45BQ5MNZ6 344 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 PEAR1Q5VY43 1037 aaPredicted RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3GQ6DHY5 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3CQ6IPX1 549 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 FBXL19Q6PCT2 694 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 PRR23CQ6ZRP0 262 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 CAMK1DQ8IU85 385 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 TBC1D3Q8IZP1 549 aaPredicted RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 BBS5Q8N3I7 341 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHD3-215ENST00000572750 TEX26Q8N6G2 289 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 HES6Q96HZ4 224 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 ALS2CR12Q96Q35 445 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 CEP41Q9BYV8 373 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 OSBPL8Q9BZF1 889 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 ATP13A3Q9H7F0 1226 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 SCUBE2Q9NQ36 999 aa15.98■□□□□ 0.15
CHD3-215ENST00000572750 EIF2B4Q9UI10 523 aaKnown RBP15.98■□□□□ 0.15
CHD3-215ENST00000572750 GGT7Q9UJ14 662 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms