RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SLC9A4Q6AI14 798 aa8.8□□□□□ -1
SMG6-210ENST00000572205 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.8□□□□□ -1
SMG6-210ENST00000572205 ERN2Q76MJ5 926 aaKnown RBP8.8□□□□□ -1
SMG6-210ENST00000572205 DSG4Q86SJ6 1040 aa8.8□□□□□ -1
SMG6-210ENST00000572205 VSIG1Q86XK7 387 aa8.8□□□□□ -1
SMG6-210ENST00000572205 SPATS2Q86XZ4 545 aaKnown RBP8.8□□□□□ -1
SMG6-210ENST00000572205 SLC22A18ASQ8N1D0 253 aa8.8□□□□□ -1
SMG6-210ENST00000572205 TEX26Q8N6G2 289 aa8.8□□□□□ -1
SMG6-210ENST00000572205 C12orf50Q8NA57 414 aaPredicted RBP8.8□□□□□ -1
SMG6-210ENST00000572205 OR14C36Q8NHC7 312 aa8.8□□□□□ -1
SMG6-210ENST00000572205 MAML1Q92585 1016 aa8.8□□□□□ -1
SMG6-210ENST00000572205 OLFM3Q96PB7 478 aa8.8□□□□□ -1
SMG6-210ENST00000572205 PSKH2Q96QS6 385 aa8.8□□□□□ -1
SMG6-210ENST00000572205 NCAPGQ9BPX3 1015 aa8.8□□□□□ -1
SMG6-210ENST00000572205 MGME1Q9BQP7 344 aa8.8□□□□□ -1
SMG6-210ENST00000572205 HEPHQ9BQS7 1158 aa8.8□□□□□ -1
SMG6-210ENST00000572205 LACRTQ9GZZ8 138 aa8.8□□□□□ -1
SMG6-210ENST00000572205 ZDHHC6Q9H6R6 413 aa8.8□□□□□ -1
SMG6-210ENST00000572205 TMEM9BQ9NQ34 198 aa8.8□□□□□ -1
SMG6-210ENST00000572205 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
SMG6-210ENST00000572205 CTTNBP2NLQ9P2B4 639 aa8.8□□□□□ -1
SMG6-210ENST00000572205 HECAQ9UBI9 543 aaPredicted RBP8.8□□□□□ -1
SMG6-210ENST00000572205 UBA2Q9UBT2 640 aaPredicted RBP8.8□□□□□ -1
SMG6-210ENST00000572205 SUSD2Q9UGT4 822 aa8.8□□□□□ -1
SMG6-210ENST00000572205 PNMA8BQ9ULN7 279 aaPredicted RBP8.8□□□□□ -1
SMG6-210ENST00000572205 VPS9D1Q9Y2B5 631 aa8.8□□□□□ -1
SMG6-210ENST00000572205 CA5BQ9Y2D0 317 aa8.8□□□□□ -1
SMG6-210ENST00000572205 HYOU1Q9Y4L1 999 aa8.8□□□□□ -1
SMG6-210ENST00000572205 SNX11Q9Y5W9 270 aa8.8□□□□□ -1
SMG6-210ENST00000572205 DSPP15924 2871 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 NBEAQ8NFP9 2946 aa8.79□□□□□ -1
SMG6-210ENST00000572205 A0A0A6YYK5 440 aaPredicted RBP8.79□□□□□ -1
SMG6-210ENST00000572205 C16orf96A6NNT2 1141 aa8.79□□□□□ -1
SMG6-210ENST00000572205 H0Y8X5 98 aa8.79□□□□□ -1
SMG6-210ENST00000572205 KPNA3O00505 521 aaPredicted RBP8.79□□□□□ -1
SMG6-210ENST00000572205 VILLO15195 856 aa8.79□□□□□ -1
SMG6-210ENST00000572205 BUB1O43683 1085 aa8.79□□□□□ -1
SMG6-210ENST00000572205 BNIP3LO60238 219 aa8.79□□□□□ -1
SMG6-210ENST00000572205 DKK1O94907 266 aa8.79□□□□□ -1
SMG6-210ENST00000572205 NDUFA10O95299 355 aa8.79□□□□□ -1
SMG6-210ENST00000572205 MAP3K6O95382 1288 aa8.79□□□□□ -1
SMG6-210ENST00000572205 CFIP05156 583 aa8.79□□□□□ -1
SMG6-210ENST00000572205 UGT2B4P06133 528 aa8.79□□□□□ -1
SMG6-210ENST00000572205 ZNF883P0CG24 379 aa8.79□□□□□ -1
SMG6-210ENST00000572205 MMP12P39900 470 aa8.79□□□□□ -1
SMG6-210ENST00000572205 MAPK8P45983 427 aa8.79□□□□□ -1
SMG6-210ENST00000572205 CSNK1DP48730 415 aa8.79□□□□□ -1
SMG6-210ENST00000572205 CSNK1EP49674 416 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 AFF3P51826 1226 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 NEK3P51956 506 aa8.79□□□□□ -1
SMG6-210ENST00000572205 CDH6P55285 790 aa8.79□□□□□ -1
SMG6-210ENST00000572205 GEMIN4P57678 1058 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 NXPH1P58417 271 aa8.79□□□□□ -1
SMG6-210ENST00000572205 RACK1P63244 317 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 IL10RBQ08334 325 aa8.79□□□□□ -1
SMG6-210ENST00000572205 MYLK3Q32MK0 819 aa8.79□□□□□ -1
SMG6-210ENST00000572205 ANKRD20A8PQ5CZ79 823 aa8.79□□□□□ -1
SMG6-210ENST00000572205 ZNF805Q5CZA5 627 aa8.79□□□□□ -1
SMG6-210ENST00000572205 FAM182AQ5T1J6 154 aa8.79□□□□□ -1
SMG6-210ENST00000572205 FAM46CQ5VWP2 391 aa8.79□□□□□ -1
SMG6-210ENST00000572205 NAPEPLDQ6IQ20 393 aa8.79□□□□□ -1
SMG6-210ENST00000572205 C11orf63Q6NUN7 778 aa8.79□□□□□ -1
SMG6-210ENST00000572205 ERMP1Q7Z2K6 904 aa8.79□□□□□ -1
SMG6-210ENST00000572205 RABEPKQ7Z6M1 372 aa8.79□□□□□ -1
SMG6-210ENST00000572205 ABI3BPQ7Z7G0 1075 aa8.79□□□□□ -1
SMG6-210ENST00000572205 RHOT2Q8IXI1 618 aa8.79□□□□□ -1
SMG6-210ENST00000572205 LRRC57Q8N9N7 239 aa8.79□□□□□ -1
SMG6-210ENST00000572205 ACRBPQ8NEB7 543 aa8.79□□□□□ -1
SMG6-210ENST00000572205 FATE1Q969F0 183 aa8.79□□□□□ -1
SMG6-210ENST00000572205 LRIG1Q96JA1 1093 aa8.79□□□□□ -1
SMG6-210ENST00000572205 CCDC42Q96M95 316 aa8.79□□□□□ -1
SMG6-210ENST00000572205 GDAP1L1Q96MZ0 367 aa8.79□□□□□ -1
SMG6-210ENST00000572205 OMDQ99983 421 aa8.79□□□□□ -1
SMG6-210ENST00000572205 USB1Q9BQ65 265 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 CPEB1Q9BZB8 566 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 FZD3Q9NPG1 666 aa8.79□□□□□ -1
SMG6-210ENST00000572205 TOR4AQ9NXH8 423 aa8.79□□□□□ -1
SMG6-210ENST00000572205 DTLQ9NZJ0 730 aa8.79□□□□□ -1
SMG6-210ENST00000572205 DKK3Q9UBP4 350 aa8.79□□□□□ -1
SMG6-210ENST00000572205 IPO11Q9UI26 975 aaKnown RBP8.79□□□□□ -1
SMG6-210ENST00000572205 BTBD3Q9Y2F9 522 aa8.79□□□□□ -1
SMG6-210ENST00000572205 DUSP10Q9Y6W6 482 aa8.79□□□□□ -1
SMG6-210ENST00000572205 TPRP12270 2363 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 A0A1W2PQU0 124 aa8.78□□□□□ -1
SMG6-210ENST00000572205 TTC24A2A3L6 582 aaPredicted RBP8.78□□□□□ -1
SMG6-210ENST00000572205 FAM47DPA6NHR8 397 aa8.78□□□□□ -1
SMG6-210ENST00000572205 ARHGAP42A6NI28 874 aa8.78□□□□□ -1
SMG6-210ENST00000572205 LRRC72A6NJI9 287 aa8.78□□□□□ -1
SMG6-210ENST00000572205 BTNL10A8MVZ5 291 aa8.78□□□□□ -1
SMG6-210ENST00000572205 PJA2O43164 708 aa8.78□□□□□ -1
SMG6-210ENST00000572205 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
SMG6-210ENST00000572205 HTRA2O43464 458 aaPredicted RBP8.78□□□□□ -1
SMG6-210ENST00000572205 FZD6O60353 706 aa8.78□□□□□ -1
SMG6-210ENST00000572205 RNGTTO60942 597 aaKnown RBP8.78□□□□□ -1
SMG6-210ENST00000572205 KCNK5O95279 499 aa8.78□□□□□ -1
SMG6-210ENST00000572205 IGSF6O95976 241 aa8.78□□□□□ -1
SMG6-210ENST00000572205 GIMD1P0DJR0 217 aa8.78□□□□□ -1
SMG6-210ENST00000572205 TIMP2P16035 220 aa8.78□□□□□ -1
SMG6-210ENST00000572205 PRLRP16471 622 aa8.78□□□□□ -1
SMG6-210ENST00000572205 CSRP1P21291 193 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms