RNA–Protein interactions for RNA: ENST00000570150.1

PKD1-238, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-238	ENST00000570150	MATN3	O15232	486 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	CD38	P28907	300 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	SLC9A4	Q6AI14	798 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	RAD9B	Q6WBX8	426 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	MFSD2A	Q8NA29	543 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	C1orf216	Q8TAB5	229 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	KLHL32	Q96NJ5	620 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	NUDCD1	Q96RS6	583 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	SLC32A1	Q9H598	525 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	TM9SF3	Q9HD45	589 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	AASDHPPT	Q9NRN7	309 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	THADA	Q6YHU6	1953 aa		18.2	■□□□□ 0.5
PKD1-238	ENST00000570150	TSPAN11	A1L157	253 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	CD48	P09326	243 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	TGM2	P21980	687 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	MMRN1	Q13201	1228 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	CCDC6	Q16204	474 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	PPP2R5E	Q16537	467 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	LEKR1	Q6ZMV7	388 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	DGLUCY	Q7Z3D6	616 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	RFX6	Q8HWS3	928 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	TEX26	Q8N6G2	289 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	CCNY	Q8ND76	341 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	DENND6B	Q8NEG7	585 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	RAPGEF5	Q92565	580 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	ARRDC3	Q96B67	414 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	MGME1	Q9BQP7	344 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	SCUBE2	Q9NQ36	999 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	DNAAF2	Q9NVR5	837 aa	Known RBP	18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	DNPEP	Q9ULA0	475 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	FADS3	Q9Y5Q0	445 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	ATXN2	Q99700	1313 aa	Known RBP	18.19	■□□□□ 0.5
PKD1-238	ENST00000570150	CHD5	Q8TDI0	1954 aa		18.19	■□□□□ 0.5
PKD1-238	ENST00000570150		A0A1W2PQU0	124 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	HNRNPA2B1	P22626	353 aa	Known RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	MAOB	P27338	520 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	CTNNA1	P35221	906 aa	Known RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	ARRB1	P49407	418 aa	Predicted RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	SCNN1B	P51168	640 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	RWDD2B	P57060	319 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	POM121L1P	Q3SYA9	428 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	ATP13A4	Q4VNC1	1196 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	PARS2	Q7L3T8	475 aa	Known RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	TMEM139	Q8IV31	216 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	CCDC50	Q8IVM0	306 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	CCDC13	Q8IYE1	715 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	TSEN2	Q8NCE0	465 aa	Known RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	CXorf40A	Q8TE69	158 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	MAML1	Q92585	1016 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	LENG8	Q96PV6	779 aa	Predicted RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	GTPBP2	Q9BX10	602 aa	Known RBP	18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	ERVMER34-1	Q9H9K5	563 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	GRPEL1	Q9HAV7	217 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	GDF3	Q9NR23	364 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	ETNK2	Q9NVF9	386 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	PCDHGB2	Q9Y5G2	931 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	PCDHA3	Q9Y5H8	950 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	HS3ST3A1	Q9Y663	406 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	CEP250	Q9BV73	2442 aa		18.18	■□□□□ 0.5
PKD1-238	ENST00000570150	PATE3	B3GLJ2	98 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	MFSD11	O43934	449 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	CCDC175	P0C221	793 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	CCNB1	P14635	433 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	TAS2R38	P59533	333 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	PPID	Q08752	370 aa	Known RBP	18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	SLC10A7	Q0GE19	358 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	GRIK2	Q13002	908 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	TAZ	Q16635	292 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	UGP2	Q16851	508 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	TCEAL6	Q6IPX3	200 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	PQLC3	Q8N755	202 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	OR6K2	Q8NGY2	324 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	P3H4	Q92791	437 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	TCEAL3	Q969E4	200 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	SLC17A9	Q9BYT1	436 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	KLHL11	Q9NVR0	708 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	DTL	Q9NZJ0	730 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	AMFR	Q9UKV5	643 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	ANKRD6	Q9Y2G4	727 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	ABCA7	Q8IZY2	2146 aa		18.17	■□□□□ 0.5
PKD1-238	ENST00000570150	C3orf70	A6NLC5	250 aa	Predicted RBP	18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	C4orf47	A7E2U8	309 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	AREL1	O15033	823 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	INSIG1	O15503	277 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	PTMA	P06454	111 aa	Known RBP	18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	TNNT1	P13805	278 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	CSRP1	P21291	193 aa	Known RBP	18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	CTNNA2	P26232	953 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	PTPN7	P35236	360 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	CDKN2B	P42772	138 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	RPL26	P61254	145 aa	Known RBP	18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	ZNF284	Q2VY69	593 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	TMEM259	Q4ZIN3	620 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	CCDC181	Q5TID7	509 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	ALG1L	Q6GMV1	187 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	SPOCD1	Q6ZMY3	1216 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	ZNF662	Q6ZS27	426 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	PEX26	Q7Z412	305 aa		18.16	■□□□□ 0.5
PKD1-238	ENST00000570150	MINDY1	Q8N5J2	469 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms