RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 HLA-BQ31612 363 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 UAP1L1Q3KQV9 507 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 SEL1L3Q68CR1 1132 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 SLC9A4Q6AI14 798 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 KIAA1161Q6NSJ0 714 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 C11orf63Q6NUN7 778 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 PIP4P1Q86T03 277 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 TTC7BQ86TV6 843 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 IQCHQ86VS3 1027 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 ZSCAN30Q86W11 494 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 CAMK1DQ8IU85 385 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 PGBD5Q8N414 524 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 TEX26Q8N6G2 289 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 PLD5Q8N7P1 536 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 MFSD2AQ8NA29 543 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 SPC24Q8NBT2 197 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 TMEM145Q8NBT3 493 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 TPCN2Q8NHX9 752 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 FATE1Q969F0 183 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 ECHDC3Q96DC8 303 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 FEM1CQ96JP0 617 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 CALR3Q96L12 384 aaKnown RBP11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 NSMCE3Q96MG7 304 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 TSGA13Q96PP4 275 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 LACRTQ9GZZ8 138 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 GOLPH3Q9H4A6 298 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 GAREM1Q9H706 876 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 IL21RQ9HBE5 538 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 DDX56Q9NY93 547 aaKnown RBP11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 HYOU1Q9Y4L1 999 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 SNX11Q9Y5W9 270 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 PCNX2A6NKB5 2137 aa11.2□□□□□ -0.62
SHCBP1-207ENST00000569702 TRAFD1O14545 582 aaPredicted RBP11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 SLC31A1O15431 190 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 PSTPIP1O43586 416 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 SPOPO43791 374 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 IPO7O95373 1038 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 CD59P13987 128 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 PRLRP16471 622 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 CCNCP24863 283 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 SCNN1BP51168 640 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 VAV2P52735 878 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 AP1S1P61966 158 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 OVGP1Q12889 678 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 HNRNPDQ14103 355 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 FGL2Q14314 439 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 IFI16Q16666 785 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 UGP2Q16851 508 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ZNF423Q2M1K9 1284 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ZFYVE27Q5T4F4 411 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 MARC1Q5VT66 337 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 BRAT1Q6PJG6 821 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 DBX2Q6ZNG2 339 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ADAT2Q7Z6V5 191 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ZSWIM9Q86XI8 627 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ACRBPQ8NEB7 543 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ASB12Q8WXK4 309 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 MAML1Q92585 1016 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 KLK6Q92876 244 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 SKA1Q96BD8 255 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 MGME1Q9BQP7 344 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 C1QTNF2Q9BXJ5 285 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 SLC17A9Q9BYT1 436 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ATP13A3Q9H7F0 1226 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 AASDHPPTQ9NRN7 309 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 DTLQ9NZJ0 730 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 GGT7Q9UJ14 662 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 ITM2BQ9Y287 266 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 FNDC3AQ9Y2H6 1198 aaKnown RBP11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 DUSP10Q9Y6W6 482 aa11.19□□□□□ -0.62
SHCBP1-207ENST00000569702 NCOR2Q9Y618 2525 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 IGLON5A6NGN9 336 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 TLR4O00206 839 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 KCNK3O14649 394 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 MATN3O15232 486 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 DFNA5O60443 496 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 KCNK5O95279 499 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 MAP3K6O95382 1288 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 KRT1P04264 644 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 ITIH2P19823 946 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 MX2P20592 715 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 HNRNPA2B1P22626 353 aaKnown RBP11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 SERPINA4P29622 427 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 CDKN2BP42772 138 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 MMP13P45452 471 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 C21orf59P57076 290 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 NXPH1P58417 271 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 ZNF235Q14590 738 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 STAT4Q14765 748 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 SLC45A4Q5BKX6 768 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 PPM1JQ5JR12 505 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 RALGPS1Q5JS13 557 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 LRRC73Q5JTD7 316 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 TIGD7Q6NT04 549 aaPredicted RBP11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 MFSD7Q6UXD7 560 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 BBS5Q8N3I7 341 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 NSMCE1Q8WV22 266 aa11.18□□□□□ -0.62
SHCBP1-207ENST00000569702 RNF25Q96BH1 459 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms