RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PROX2Q3B8N5 592 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 FBXL19Q6PCT2 694 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 GDPD4Q6W3E5 623 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 MARCH9Q86YJ5 346 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 CPNE8Q86YQ8 564 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 SLC25A45Q8N413 288 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 RYBPQ8N488 228 aaPredicted RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 EID2Q8N6I1 236 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 DENND6BQ8NEG7 585 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 IQCDQ96DY2 449 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 KLHDC7BQ96G42 594 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 BTBD6Q96KE9 485 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 CNDP2Q96KP4 475 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 LENG8Q96PV6 779 aaPredicted RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 SLC17A9Q9BYT1 436 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 CPEB1Q9BZB8 566 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 XPO4Q9C0E2 1151 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 MRPL47Q9HD33 250 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 ETNK2Q9NVF9 386 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 KLHL11Q9NVR0 708 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 UCKL1Q9NWZ5 548 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 MYO1AQ9UBC5 1043 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 UBA2Q9UBT2 640 aaPredicted RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 PNMA8BQ9ULN7 279 aaPredicted RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 PCDHGA1Q9Y5H4 931 aa7.92□□□□□ -1.14
CDH3-209ENST00000569080 BZW2Q9Y6E2 419 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
CDH3-209ENST00000569080 LY6G6EA0A0G2JKS1 128 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 SPTY2D1-AS1A0A0U1RR47 76 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 GOLGA6L19H0YKK7 550 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 TAF4O00268 1085 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 TRIM38O00635 465 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ENC1O14682 589 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 BUB1BO60566 1050 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 PIAS2O75928 621 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 RNF8O76064 485 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 PAK4O96013 591 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 RARAP10276 462 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 NME1P15531 152 aaKnown RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 TIMP2P16035 220 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 PTMSP20962 102 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 DGKAP23743 735 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 CASP14P31944 242 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 MMP12P39900 470 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ARSEP51690 589 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ZNF135P52742 658 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 CLDN6P56747 220 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 TPM4P67936 248 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 RALGDSQ12967 914 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ASTE1Q2TB18 679 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 PPP6R3Q5H9R7 873 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 DHRS13Q6UX07 377 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 Q6ZSR6 202 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 POLNQ7Z5Q5 900 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 PTAR1Q7Z6K3 402 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 ZNF354CQ86Y25 554 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 TP53I13Q8NBR0 393 aaPredicted RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 TSEN2Q8NCE0 465 aaKnown RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 FAM174AQ8TBP5 190 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 FAM71BQ8TC56 605 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 TEKT4Q8WW24 435 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ZCCHC14Q8WYQ9 949 aaKnown RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 SPOCK2Q92563 424 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 CENPTQ96BT3 561 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ECHDC3Q96DC8 303 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 IFT43Q96FT9 208 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 FEM1CQ96JP0 617 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 CSPG4P5Q96PW8 444 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 DNAJC7Q99615 494 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 NUP85Q9BW27 656 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 CALN1Q9BXU9 219 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 PCDH18Q9HCL0 1135 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.91□□□□□ -1.14
CDH3-209ENST00000569080 DONSONQ9NYP3 566 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 KLF15Q9UIH9 416 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 ANAPC7Q9UJX3 599 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 HS3ST3A1Q9Y663 406 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 U3KQA8 63 aa7.91□□□□□ -1.14
CDH3-209ENST00000569080 TDRD6O60522 2096 aaKnown RBP7.91□□□□□ -1.14
CDH3-209ENST00000569080 FAM208BQ5VWN6 2430 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ACACAQ13085 2346 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 FAM149AA5PLN7 773 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ARHGAP42A6NI28 874 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 SRRM3A6NNA2 597 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 H3BRJ5 948 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 TRAFD1O14545 582 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 SIGLEC6O43699 453 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 RFPL3O75679 317 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 LDOC1O95751 146 aaPredicted RBP7.9□□□□□ -1.14
CDH3-209ENST00000569080 CSF2P04141 144 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 CD48P09326 243 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 GM2AP17900 193 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 CR2P20023 1033 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 IL4RP24394 825 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 ACP1P24666 158 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 RABIFP47224 123 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 CSNK1DP48730 415 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 SUOXP51687 545 aa7.9□□□□□ -1.14
CDH3-209ENST00000569080 IL10RBQ08334 325 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms