RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ADRA1AP35348 466 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 MTTPP55157 894 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 RAB10P61026 200 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 HNRNPDQ14103 355 aaKnown RBP17.91■□□□□ 0.46
CMTM3-214ENST00000567572 IKBKEQ14164 716 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 SH2D4BQ5SQS7 431 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 AFMIDQ63HM1 303 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 RWDD4Q6NW29 188 aaKnown RBP17.91■□□□□ 0.46
CMTM3-214ENST00000567572 TMEM154Q6P9G4 183 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 C16orf89Q6UX73 402 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 FBXW8Q8N3Y1 598 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 TMEM151AQ8N4L1 468 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 POU5F2Q8N7G0 328 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 C2orf15Q8WU43 125 aaKnown RBP17.91■□□□□ 0.46
CMTM3-214ENST00000567572 GATA6Q92908 595 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 CELF6Q96J87 481 aaKnown RBP17.91■□□□□ 0.46
CMTM3-214ENST00000567572 SERPINI1Q99574 410 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 ECSITQ9BQ95 431 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 APOL2Q9BQE5 337 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 WBP1LQ9NX94 342 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 VPS28Q9UK41 221 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 TLR6Q9Y2C9 796 aa17.91■□□□□ 0.46
CMTM3-214ENST00000567572 NPHS1O60500 1241 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 RTN3O95197 1032 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 HAPLN1P10915 354 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 CDC25CP30307 473 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 USP4Q13107 963 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 LTBP2Q14767 1821 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 GREB1Q4ZG55 1949 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 SLC9B1Q4ZJI4 515 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 VWA5B1Q5TIE3 1220 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 PRSS55Q6UWB4 352 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 RNF168Q8IYW5 571 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 RP9Q8TA86 221 aaKnown RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 GPR152Q8TDT2 470 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 SLC39A13Q96H72 371 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 CWH43Q9H720 699 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 BCAP29Q9UHQ4 241 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 SSX2IPQ9Y2D8 614 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 SLC27A5Q9Y2P5 690 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 DFFAO00273 331 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 ZBTB14O43829 449 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 UPP2O95045 317 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 LINGO3P0C6S8 592 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 STMN1P16949 149 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 TPH1P17752 444 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 PAX7P23759 505 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 YWHAQP27348 245 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 GRIA4P48058 902 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 ARCN1P48444 511 aaKnown RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 TBL3Q12788 808 aaKnown RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 CUL3Q13618 768 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 MGAT5BQ3V5L5 792 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 DENND5AQ6IQ26 1287 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 LRRC8EQ6NSJ5 796 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 IZUMO2Q6UXV1 221 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 FRMD7Q6ZUT3 714 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 OTOP3Q7RTS5 596 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 GALNT7Q86SF2 657 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 KBTBD2Q8IY47 623 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 DEFB107AQ8IZN7 70 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 PHTF2Q8N3S3 785 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 PPP2R3CQ969Q6 453 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 VN1R3Q9BXE9 311 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 SIK2Q9H0K1 926 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 SPATS2LQ9NUQ6 558 aaKnown RBP17.9■□□□□ 0.46
CMTM3-214ENST00000567572 COMMD8Q9NX08 183 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 CLIC5Q9NZA1 410 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 PDP2Q9P2J9 529 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 PPM1HQ9ULR3 514 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 POMPQ9Y244 141 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 ATP11BQ9Y2G3 1177 aa17.9■□□□□ 0.46
CMTM3-214ENST00000567572 RGSL1A5PLK6 1076 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 DPPA5A6NC42 116 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 BUD23O43709 281 aaKnown RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 SBK3P0C264 359 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 SP100P23497 879 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 PPARGP37231 505 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 ALDH7A1P49419 539 aaKnown RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 DNAJB13P59910 316 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 POU4F1Q01851 419 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 SMAD1Q15797 465 aaKnown RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 RALGPS1Q5JS13 557 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 SLC8B1Q6J4K2 584 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 PIWIL4Q7Z3Z4 852 aaKnown RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 CENPLQ8N0S6 344 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 RTL3Q8N8U3 475 aaKnown RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 C2CD4AQ8NCU7 369 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 CALML6Q8TD86 181 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 FBXO32Q969P5 355 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 CCDC126Q96EE4 140 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 C1orf74Q96LT6 269 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 SEPT5Q99719 369 aaPredicted RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 MRPL46Q9H2W6 279 aaKnown RBP17.89■□□□□ 0.45
CMTM3-214ENST00000567572 ZNF385DQ9H6B1 395 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 TREX1Q9NSU2 369 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 MTRRQ9UBK8 725 aa17.89■□□□□ 0.45
CMTM3-214ENST00000567572 E9PBE3 544 aa17.88■□□□□ 0.45
CMTM3-214ENST00000567572 TK2O00142 265 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms