RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 CAMK1DQ8IU85 385 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 CCDC13Q8IYE1 715 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 RYBPQ8N488 228 aaPredicted RBP12.55□□□□□ -0.4
RNF40-211ENST00000567365 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 GANCQ8TET4 914 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 RAB7BQ96AH8 199 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 PPP1R16AQ96I34 528 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 ZNF641Q96N77 438 aaPredicted RBP12.55□□□□□ -0.4
RNF40-211ENST00000567365 ZNF830Q96NB3 372 aaPredicted RBP12.55□□□□□ -0.4
RNF40-211ENST00000567365 MAK16Q9BXY0 300 aaKnown RBP12.55□□□□□ -0.4
RNF40-211ENST00000567365 BRD8Q9H0E9 1235 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 SUV39H2Q9H5I1 410 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 CAPN10Q9HC96 672 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 LZTFL1Q9NQ48 299 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 VPS45Q9NRW7 570 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 SEMA4GQ9NTN9 838 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 ATP8A1Q9Y2Q0 1164 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
RNF40-211ENST00000567365 LRRK1Q38SD2 2015 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 A0A1W2PPC4 97 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 TTC24A2A3L6 582 aaPredicted RBP12.54□□□□□ -0.4
RNF40-211ENST00000567365 PATE3B3GLJ2 98 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 KCNK1O00180 336 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 NRDCO43847 1150 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 APOC2P02655 101 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 HLA-DQB2P05538 268 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 CD27P26842 260 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 MAOBP27338 520 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 MAPK8P45983 427 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 MAXP61244 160 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 DYNLT1P63172 113 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 NIPAL4Q0D2K0 466 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 WASHC5Q12768 1159 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 ZNF235Q14590 738 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 NOMO1Q15155 1222 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 CCDC6Q16204 474 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 ODF2Q5BJF6 829 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 WDR45BQ5MNZ6 344 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 KAZNQ674X7 775 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 SLC23A3Q6PIS1 610 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 DGLUCYQ7Z3D6 616 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 PIGKQ92643 395 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 TADA1Q96BN2 335 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 HEMGNQ9BXL5 484 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 SMOC1Q9H4F8 434 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 NOD2Q9HC29 1040 aa12.54□□□□□ -0.4
RNF40-211ENST00000567365 RBM22Q9NW64 420 aaKnown RBP eCLIP12.54□□□□□ -0.44e-7■■□□□ 11.6
RNF40-211ENST00000567365 EIF2B4Q9UI10 523 aaKnown RBP12.54□□□□□ -0.4
RNF40-211ENST00000567365 TPX2Q9ULW0 747 aaKnown RBP12.54□□□□□ -0.4
RNF40-211ENST00000567365 ZFR2Q9UPR6 939 aaKnown RBP12.54□□□□□ -0.4
RNF40-211ENST00000567365 ATXN2Q99700 1313 aaKnown RBP12.54□□□□□ -0.4
RNF40-211ENST00000567365 PPP1R12AO14974 1030 aaPredicted RBP12.53□□□□□ -0.4
RNF40-211ENST00000567365 FZD6O60353 706 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 SOCS5O75159 536 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 JCHAINP01591 159 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 MMP2P08253 660 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 ITIH2P19823 946 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 SCNN1BP51168 640 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 SUOXP51687 545 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 BNC1Q01954 994 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 TRAF2Q12933 501 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
RNF40-211ENST00000567365 XRCC4Q13426 336 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 FGL2Q14314 439 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 SF3A2Q15428 464 aaKnown RBP12.53□□□□□ -0.4
RNF40-211ENST00000567365 UGP2Q16851 508 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 ZNF284Q2VY69 593 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 FAM182AQ5T1J6 154 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 TCEAL6Q6IPX3 200 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 PRR23CQ6ZRP0 262 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 BZW1Q7L1Q6 419 aaKnown RBP12.53□□□□□ -0.4
RNF40-211ENST00000567365 HORMAD1Q86X24 394 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 CCDC50Q8IVM0 306 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 GPR161Q8N6U8 529 aaKnown RBP12.53□□□□□ -0.4
RNF40-211ENST00000567365 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 TRIM58Q8NG06 486 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 ACTL9Q8TC94 416 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 TCEAL3Q969E4 200 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.4
RNF40-211ENST00000567365 TLR10Q9BXR5 811 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 POLR1EQ9GZS1 481 aaKnown RBP12.53□□□□□ -0.4
RNF40-211ENST00000567365 ATP13A3Q9H7F0 1226 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 NT5MQ9NPB1 228 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 DYRK4Q9NR20 520 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 RXFP3Q9NSD7 469 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 DLL3Q9NYJ7 618 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 GGT7Q9UJ14 662 aa12.53□□□□□ -0.4
RNF40-211ENST00000567365 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.52□□□□□ -0.41
RNF40-211ENST00000567365 A0A1W2PQU0 124 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 TCRBV7S2A1N4TA0A589 114 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 LNP1A1A4G5 178 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 FAM47DPA6NHR8 397 aa12.52□□□□□ -0.41
RNF40-211ENST00000567365 MEI4A8MW99 385 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms