RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 WSB2Q9NYS7 404 aaPredicted RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 SEPT10Q9P0V9 454 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 RNF14Q9UBS8 474 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 TTLL3Q9Y4R7 772 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 SAR1BQ9Y6B6 198 aa20.52■□□□□ 0.88
RNF40-210ENST00000566811 TNRC6BQ9UPQ9 1833 aaKnown RBP20.52■□□□□ 0.88
RNF40-210ENST00000566811 GOLGA6L10A0A0M3HER8 536 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 A0A1W2PP55 124 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 RNF103O00237 685 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 AP1G1O43747 822 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 LIASO43766 372 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 OPHN1O60890 802 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 NDUFS2O75306 463 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 RHOBTB1O94844 696 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 STIP1P31948 543 aaKnown RBP20.51■□□□□ 0.87
RNF40-210ENST00000566811 ITKQ08881 620 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 WASHC5Q12768 1159 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 CCNG2Q16589 344 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 AGBL4Q5VU57 503 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 NEK5Q6P3R8 708 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 FBXL19Q6PCT2 694 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 ECHDC3Q96DC8 303 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 ERLEC1Q96DZ1 483 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 TOE1Q96GM8 510 aaKnown RBP20.51■□□□□ 0.87
RNF40-210ENST00000566811 WDR24Q96S15 920 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 SEMA3CQ99985 751 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 SLC25A51Q9H1U9 297 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 PREBQ9HCU5 417 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 KLHL8Q9P2G9 620 aaPredicted RBP20.51■□□□□ 0.87
RNF40-210ENST00000566811 RAB23Q9ULC3 237 aa20.51■□□□□ 0.87
RNF40-210ENST00000566811 C16orf96A6NNT2 1141 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 KCNN4O15554 427 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 MAP3K13O43283 966 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 HTRA2O43464 458 aaPredicted RBP20.5■□□□□ 0.87
RNF40-210ENST00000566811 PLRG1O43660 514 aaKnown RBP20.5■□□□□ 0.87
RNF40-210ENST00000566811 SEMA4FO95754 770 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 ITGAVP06756 1048 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 ADRB3P13945 408 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 RBL1P28749 1068 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 NUDT1P36639 197 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 ADPRHP54922 357 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 MAXP61244 160 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 ELP6Q0PNE2 266 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 LPCAT2Q7L5N7 544 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 OR2T34Q8NGX1 318 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 RTP4Q96DX8 246 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 LOXL4Q96JB6 756 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 KLHL32Q96NJ5 620 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 DUSP15Q9H1R2 295 aaPredicted RBP20.5■□□□□ 0.87
RNF40-210ENST00000566811 NOD2Q9HC29 1040 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 VPS45Q9NRW7 570 aa20.5■□□□□ 0.87
RNF40-210ENST00000566811 CACNA1AO00555 2505 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 TCRBV7S2A1N4TA0A589 114 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 HRO43593 1189 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 RPL26P61254 145 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 RPL6Q02878 288 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 LMNB2Q03252 620 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 CNTN1Q12860 1018 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 SIM2Q14190 667 aaPredicted RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 OASLQ15646 514 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 PIP5KL1Q5T9C9 394 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 PMS2CLQ68D20 193 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 NYAP1Q6ZVC0 841 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 PARS2Q7L3T8 475 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 NDUFAF2Q8N183 169 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 CNTD1Q8N815 330 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 VOPP1Q96AW1 172 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 ARRDC3Q96B67 414 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 LRRC45Q96CN5 670 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 IMP4Q96G21 291 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 SPATA13Q96N96 652 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 AGAP3Q96P47 875 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 NEUROG2Q9H2A3 272 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 GLOD4Q9HC38 313 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 DNPEPQ9ULA0 475 aa20.49■□□□□ 0.87
RNF40-210ENST00000566811 RPL26L1Q9UNX3 145 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 R3HDM2Q9Y2K5 976 aaKnown RBP20.49■□□□□ 0.87
RNF40-210ENST00000566811 GOLGA6CA6NDK9 693 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 GOLGA6BA6NDN3 693 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 C5orf60A6NFR6 353 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 TRAFD1O14545 582 aaPredicted RBP20.48■□□□□ 0.87
RNF40-210ENST00000566811 PIGNO95427 931 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 GOLGA6DP0CG33 693 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 XPAP23025 273 aaPredicted RBP20.48■□□□□ 0.87
RNF40-210ENST00000566811 CASQ1P31415 396 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 GKP32189 559 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 HOXD12P35452 270 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 TNNT3P45378 269 aaPredicted RBP20.48■□□□□ 0.87
RNF40-210ENST00000566811 SIX1Q15475 284 aaPredicted RBP20.48■□□□□ 0.87
RNF40-210ENST00000566811 P3H1Q32P28 736 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 ARMC12Q5T9G4 340 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 ERAP2Q6P179 960 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 C4orf22Q6V702 233 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 ZNF567Q8N184 647 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 PAF1Q8N7H5 531 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 ARRDC2Q8TBH0 407 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 RLN3Q8WXF3 142 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 FCRL5Q96RD9 977 aa20.48■□□□□ 0.87
RNF40-210ENST00000566811 TDRD1Q9BXT4 1180 aaKnown RBP20.48■□□□□ 0.87
RNF40-210ENST00000566811 GBA3Q9H227 469 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms