RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ZNF567Q8N184 647 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 FAM71DQ8N9W8 422 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 CHST14Q8NCH0 376 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 IMP4Q96G21 291 aaKnown RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 MRGPRX1Q96LB2 322 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 CCDC114Q96M63 670 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 GDAP1L1Q96MZ0 367 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF641Q96N77 438 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 TUBGCP5Q96RT8 1024 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 FERMT1Q9BQL6 677 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 CAPS2Q9BXY5 557 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 POLR1EQ9GZS1 481 aaKnown RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 NOD2Q9HC29 1040 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 GLOD4Q9HC38 313 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 NT5MQ9NPB1 228 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 FAM114A2Q9NRY5 505 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 HAUS2Q9NVX0 235 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 FEZ2Q9UHY8 353 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ZNF148Q9UQR1 794 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 WASF2Q9Y6W5 498 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 EML5Q05BV3 1969 aa12.77□□□□□ -0.37
SF3B3-206ENST00000565990 ZDBF2Q9HCK1 2354 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 CCDC163A0A0D9SF12 145 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 EIF3HO15372 352 aaKnown RBP eCLIP12.76□□□□□ -0.37
SF3B3-206ENST00000565990 INSIG1O15503 277 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 KCNN4O15554 427 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 MMP2P08253 660 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 COILP38432 576 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-206ENST00000565990 MAPK8P45983 427 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 KCNJ1P48048 391 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 FNTAP49354 379 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SCNN1BP51168 640 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 GYS2P54840 703 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 GDF10P55107 478 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 MAXP61244 160 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 AP1S1P61966 158 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 RPS14P62263 151 aaKnown RBP12.76□□□□□ -0.37
SF3B3-206ENST00000565990 ZBTB16Q05516 673 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 RAD51Q06609 339 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SLC14A2Q15849 920 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 P3H1Q32P28 736 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 TMEM31Q5JXX7 168 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 DSG4Q86SJ6 1040 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 KLHDC8BQ8IXV7 354 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 OR8D1Q8WZ84 308 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 NELL1Q92832 810 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SLCO2A1Q92959 643 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 FAM131CQ96AQ9 280 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 FCRL5Q96RD9 977 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SEMA3CQ99985 751 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 TM6SF2Q9BZW4 377 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SLC25A51Q9H1U9 297 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 RASSF4Q9H2L5 321 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 ITM2CQ9NQX7 267 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SPATA6Q9NWH7 488 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-206ENST00000565990 IL36AQ9UHA7 158 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 PCYOX1Q9UHG3 505 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
SF3B3-206ENST00000565990 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 SCML1Q9UN30 329 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 PLXND1Q9Y4D7 1925 aa12.76□□□□□ -0.37
SF3B3-206ENST00000565990 GOLGA6L10A0A0M3HER8 536 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 TTC24A2A3L6 582 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 FAM86C2PA6NEL3 165 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 FAM187AA6NFU0 413 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 MYO1CO00159 1063 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 TRAFD1O14545 582 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 HTRA2O43464 458 aaPredicted RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 FZD6O60353 706 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 OPHN1O60890 802 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 PHF2O75151 1096 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 LEFTY1O75610 366 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 GJB3O75712 270 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 APBB3O95704 486 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 CPP00450 1065 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 IGLV3-19P01714 112 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 PRNPP04156 253 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 NDUFV2P19404 249 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 C5AR1P21730 350 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 GKP32189 559 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 NRLP54845 237 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 CORO7P57737 925 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 PARP6Q2NL67 630 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 FAM182AQ5T1J6 154 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 AGBL2Q5U5Z8 902 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 C4orf22Q6V702 233 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 PRPF39Q86UA1 669 aaKnown RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 MMAAQ8IVH4 418 aaKnown RBP12.75□□□□□ -0.37
SF3B3-206ENST00000565990 PIP4K2CQ8TBX8 421 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 ECHDC3Q96DC8 303 aa12.75□□□□□ -0.37
SF3B3-206ENST00000565990 EXOC2Q96KP1 924 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms