RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 CENPPQ6IPU0 288 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 RINT1Q6NUQ1 792 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PNCKQ6P2M8 343 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 FUT10Q6P4F1 479 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ALKBH5Q6P6C2 394 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 DPY19L3Q6ZPD9 716 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 DPH6Q7L8W6 267 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF438Q7Z4V0 828 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ASPGQ86U10 573 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SLC9B2Q86UD5 537 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TBC1D10CQ8IV04 446 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 NUDCD3Q8IVD9 361 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 CLEC4FQ8N1N0 589 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ARFGAP1Q8N6T3 406 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 POC5Q8NA72 575 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 C3orf58Q8NDZ4 430 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 OR10T2Q8NGX3 314 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 POMGNT1Q8WZA1 660 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 GTF2H4Q92759 462 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PROX1Q92786 737 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 COPS5Q92905 334 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TCEAL3Q969E4 200 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TRMT2BQ96GJ1 504 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ZC3H10Q96K80 434 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ZSWIM3Q96MP5 696 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PIP5K1AQ99755 562 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 FAM213AQ9BRX8 229 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SLC13A1Q9BZW2 595 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TRIM31Q9BZY9 425 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 MMP27Q9H306 513 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 ELAC1Q9H777 363 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 POLR1BQ9H9Y6 1135 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 MLXIPLQ9NP71 852 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 PNPLA8Q9NP80 782 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 UFSP2Q9NUQ7 469 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 EXD2Q9NVH0 621 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 NINJ2Q9NZG7 142 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 EPHA6Q9UF33 1036 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 DCTN4Q9UJW0 460 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 NAGPAQ9UK23 515 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 FBXO5Q9UKT4 447 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 AGO1Q9UL18 857 aaKnown RBP6.35□□□□□ -1.39
PTPN9-204ENST00000564970 AGTPBP1Q9UPW5 1226 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TCAF1Q9Y4C2 921 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 TRPV2Q9Y5S1 764 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 KIF1AQ12756 1690 aa6.35□□□□□ -1.39
PTPN9-204ENST00000564970 KIF13BQ9NQT8 1826 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 KIDINS220Q9ULH0 1771 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 MARF1Q9Y4F3 1742 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 UTYO14607 1347 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TARM1B6A8C7 271 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 KPNA3O00505 521 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TSPAN4O14817 238 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PPEF1O14829 653 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZBTB43O43298 467 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PPM1BO75688 479 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 DLGAP3O95886 979 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 GNRH1P01148 92 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PRKCBP05771 671 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 KRT18P05783 430 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ASNSP08243 561 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SUPT20HL2P0C7V6 817 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 BMP2P12643 396 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 AKR1B1P15121 316 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ATF2P15336 505 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF182P17025 639 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF30P17039 623 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ARF4P18085 180 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 C4BPBP20851 252 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 POU1F1P28069 291 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TRHRP34981 398 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ADD2P35612 726 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ALDH7A1P49419 539 aaKnown RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SCNN1GP51170 649 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RAD23AP54725 363 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 WNT7BP56706 349 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 OR2B6P58173 313 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 HAND2P61296 217 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 AP1S1P61966 158 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PLIN5Q00G26 463 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PRKCDQ05655 676 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 CDH17Q12864 832 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ORC2Q13416 577 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 FLOT2Q14254 428 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF273Q14593 569 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 CBX2Q14781 532 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF169Q14929 603 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 ZNF174Q15697 407 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 FBXO48Q5FWF7 155 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 EFHC2Q5JST6 749 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 KRBOX4Q5JUW0 171 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 STXBP5Q5T5C0 1151 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 C10orf62Q5T681 223 aaPredicted RBP6.34□□□□□ -1.39
PTPN9-204ENST00000564970 PDPK2PQ6A1A2 396 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 SDE2Q6IQ49 451 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 RNF207Q6ZRF8 634 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 CATSPERGQ6ZRH7 1159 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 TMEM26Q6ZUK4 368 aa6.34□□□□□ -1.39
PTPN9-204ENST00000564970 BBS12Q6ZW61 710 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms