RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 GRM8O00222 908 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 MSI1O43347 362 aaKnown RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 CHKAP35790 457 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 STAT1P42224 750 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 ADPRHP54922 357 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 KRTAP10-11P60412 298 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 GALNT3Q14435 633 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 INPP5JQ15735 1006 aaPredicted RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 TUBB8Q3ZCM7 444 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 CCDC152Q4G0S7 254 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 KIAA1755Q5JYT7 1200 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 TTC39AQ5SRH9 613 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 AWAT2Q6E213 333 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 TANGO2Q6ICL3 276 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 LDHAL6AQ6ZMR3 332 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 PPHLN1Q8NEY8 458 aaKnown RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 NSMCE1Q8WV22 266 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 ARHGAP45Q92619 1136 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 ATP2A3Q93084 1043 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 ZBTB9Q96C00 473 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 GCC1Q96CN9 775 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 ADAD1Q96M93 576 aaKnown RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 PIGSQ96S52 555 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 NPAS1Q99742 590 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 WDR83Q9BRX9 315 aaKnown RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 TMX4Q9H1E5 349 aaPredicted RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 PDE11AQ9HCR9 933 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 C9orf78Q9NZ63 289 aaPredicted RBP5.31□□□□□ -1.56
LINC00254-201ENST00000563416 COG5Q9UP83 839 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 PCDHA10Q9Y5I2 948 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 LAMB1P07942 1786 aa5.31□□□□□ -1.56
LINC00254-201ENST00000563416 CDK5RAP2Q96SN8 1893 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 CACNA1IQ9P0X4 2223 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 AGAP5A6NIR3 686 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 ZNF814B7Z6K7 855 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 HNRNPRO43390 633 aaKnown RBP5.3□□□□□ -1.56
LINC00254-201ENST00000563416 LCKP06239 509 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 PSG1P11464 419 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 OAZ1P54368 228 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 GEMIN4P57678 1058 aaKnown RBP5.3□□□□□ -1.56
LINC00254-201ENST00000563416 SMTNL2Q2TAL5 461 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 C6orf10Q5SRN2 563 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 JAKMIP3Q5VZ66 844 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 DGAT2L7PQ6IED9 249 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 LIN54Q6MZP7 749 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 CCDC174Q6PII3 467 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 KLBQ86Z14 1044 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 SCAMP5Q8TAC9 235 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 STT3BQ8TCJ2 826 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 SLC2A12Q8TD20 617 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 OTUD7AQ8TE49 926 aaPredicted RBP5.3□□□□□ -1.56
LINC00254-201ENST00000563416 CLEC4CQ8WTT0 213 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 MPP4Q96JB8 637 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 TRAPPC9Q96Q05 1148 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 PAGR1Q9BTK6 254 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 MAGEH1Q9H213 219 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 VPS33BQ9H267 617 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 TASP1Q9H6P5 420 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 TXNRD2Q9NNW7 524 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 FZD3Q9NPG1 666 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 SAGE1Q9NXZ1 904 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 PCDHA12Q9UN75 941 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 MYH2Q9UKX2 1941 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 ZNF609O15014 1411 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 DOCK2Q92608 1830 aa5.3□□□□□ -1.56
LINC00254-201ENST00000563416 CEP350Q5VT06 3117 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 FAM90A10PA6NDY2 464 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 GLTPD2A6NH11 291 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 B4DGG1 531 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 KCNJ18B7U540 433 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 OAZ2O95190 189 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 TBXAS1P24557 533 aaPredicted RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 RPS8P62241 208 aaKnown RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 GAD2Q05329 585 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 TBX2Q13207 712 aaPredicted RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 SIM2Q14190 667 aaPredicted RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 SLC4A8Q2Y0W8 1093 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 RABL6Q3YEC7 729 aaPredicted RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 GALNTL6Q49A17 601 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 PIK3CD-AS1Q5SR53 167 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 RFX8Q6ZV50 586 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 B4GALNT4Q76KP1 1039 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 MDGA2Q7Z553 956 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 ANKS1BQ7Z6G8 1248 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 TECPR1Q7Z6L1 1165 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 GLCCI1Q86VQ1 547 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 ANKRD18AQ8IVF6 992 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 EXD3Q8N9H8 876 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 RUBCNQ92622 972 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 SKA1Q96BD8 255 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 DDX23Q9BUQ8 820 aaKnown RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 API5Q9BZZ5 524 aaKnown RBP5.29□□□□□ -1.56
LINC00254-201ENST00000563416 USP44Q9H0E7 712 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 FAM234AQ9H0X4 552 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 AAMDCQ9H7C9 122 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 SLC25A13Q9UJS0 675 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 FOCADQ5VW36 1801 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 MAST2Q6P0Q8 1798 aa5.29□□□□□ -1.56
LINC00254-201ENST00000563416 CXorf65A6NEN9 183 aa5.28□□□□□ -1.56
LINC00254-201ENST00000563416 HMX3A6NHT5 357 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms