RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 SLC32A1Q9H598 525 aa28.62■■■□□ 2.17
NME3-203ENST00000563367 SUV39H2Q9H5I1 410 aa28.62■■■□□ 2.17
NME3-203ENST00000563367 PCDHA13Q9Y5I0 950 aa28.62■■■□□ 2.17
NME3-203ENST00000563367 TSPAN6O43657 245 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 MFSD11O43934 449 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 KDELR1P24390 212 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 SLC45A4Q5BKX6 768 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 SPATS2Q86XZ4 545 aaKnown RBP28.61■■■□□ 2.17
NME3-203ENST00000563367 CAMK1DQ8IU85 385 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 ATPAF2Q8N5M1 289 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 PQLC3Q8N755 202 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 PSKH2Q96QS6 385 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 SLC17A9Q9BYT1 436 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 SEPT3Q9UH03 358 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 HYOU1Q9Y4L1 999 aa28.61■■■□□ 2.17
NME3-203ENST00000563367 TDRD6O60522 2096 aaKnown RBP28.61■■■□□ 2.17
NME3-203ENST00000563367 SOWAHDA6NJG2 315 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 HNRNPA2B1P22626 353 aaKnown RBP28.6■■■□□ 2.17
NME3-203ENST00000563367 NXPH1P58417 271 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 FAM193AP78312 1265 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 NSUN2Q08J23 767 aaKnown RBP eCLIP28.6■■■□□ 2.17
NME3-203ENST00000563367 GRM3Q14832 879 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 PAFAH1B3Q15102 231 aaKnown RBP28.6■■■□□ 2.17
NME3-203ENST00000563367 ZFYVE27Q5T4F4 411 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 DBX2Q6ZNG2 339 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 NAXDQ8IW45 347 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 MAP7D3Q8IWC1 876 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 PGBD5Q8N414 524 aa28.6■■■□□ 2.17
NME3-203ENST00000563367 TSPAN11A1L157 253 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 TTC24A2A3L6 582 aaPredicted RBP28.59■■■□□ 2.17
NME3-203ENST00000563367 IGLON5A6NGN9 336 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 NEMP1O14524 444 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 PAK4O96013 591 aaPredicted RBP28.59■■■□□ 2.17
NME3-203ENST00000563367 IL9RQ01113 521 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 SHBQ15464 509 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 IQCHQ86VS3 1027 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 ZSWIM9Q86XI8 627 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 ZNF641Q96N77 438 aaPredicted RBP28.59■■■□□ 2.17
NME3-203ENST00000563367 TUBGCP5Q96RT8 1024 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 ELF4Q99607 663 aaPredicted RBP28.59■■■□□ 2.17
NME3-203ENST00000563367 GDF3Q9NR23 364 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 PCDHGB2Q9Y5G2 931 aa28.59■■■□□ 2.17
NME3-203ENST00000563367 A0A1B0GTQ1 180 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 SPAARA0A1B0GVQ0 90 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 C3orf70A6NLC5 250 aaPredicted RBP28.58■■■□□ 2.17
NME3-203ENST00000563367 RAD51BO15315 384 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 MAP3K6O95382 1288 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 AKT2P31751 481 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 CYLC1P35663 651 aaPredicted RBP28.58■■■□□ 2.17
NME3-203ENST00000563367 SCNN1BP51168 640 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 CLDN2P57739 230 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 GALNT2Q10471 571 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 SPA17Q15506 151 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 HCAR2Q8TDS4 363 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 C1QTNF2Q9BXJ5 285 aa28.58■■■□□ 2.17
NME3-203ENST00000563367 EPN1Q9Y6I3 576 aaPredicted RBP28.58■■■□□ 2.17
NME3-203ENST00000563367 LRRD1A4D1F6 860 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 COMTP21964 271 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 NOP2P46087 812 aaKnown RBP28.57■■■□□ 2.16
NME3-203ENST00000563367 CCT8P50990 548 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 RENBPP51606 427 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 HADHBP55084 474 aaKnown RBP28.57■■■□□ 2.16
NME3-203ENST00000563367 GCNT7Q6ZNI0 430 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 TMTC1Q8IUR5 882 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 SETD7Q8WTS6 366 aaKnown RBP28.57■■■□□ 2.16
NME3-203ENST00000563367 KLHDC7BQ96G42 594 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 RNF157Q96PX1 679 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 ATP13A3Q9H7F0 1226 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 BTBD3Q9Y2F9 522 aa28.57■■■□□ 2.16
NME3-203ENST00000563367 DFNA5O60443 496 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 CBFA2T3O75081 653 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 NDUFA10O95299 355 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 GARSP41250 739 aaKnown RBP28.56■■■□□ 2.16
NME3-203ENST00000563367 SLC1A1P43005 524 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 GBE1Q04446 702 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 OVGP1Q12889 678 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 SLC10A2Q12908 348 aaPredicted RBP28.56■■■□□ 2.16
NME3-203ENST00000563367 ZNF235Q14590 738 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 UGP2Q16851 508 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 LRRC38Q5VT99 294 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 RAD9BQ6WBX8 426 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 LRRC49Q8IUZ0 686 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 LRRN4Q8WUT4 740 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 KLF6Q99612 283 aaPredicted RBP28.56■■■□□ 2.16
NME3-203ENST00000563367 GOLPH3Q9H4A6 298 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 PCOLCE2Q9UKZ9 415 aa28.56■■■□□ 2.16
NME3-203ENST00000563367 PCDHGA12O60330 932 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 MMP20O60882 483 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 THEGLP0DJG4 465 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 TNNT1P13805 278 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 CR2P20023 1033 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 SERPINA4P29622 427 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 SGCGQ13326 291 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 ABI3BPQ7Z7G0 1075 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 ZSCAN30Q86W11 494 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 OR13H1Q8NG92 308 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 ECHDC3Q96DC8 303 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 BMFQ96LC9 184 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 MGME1Q9BQP7 344 aa28.55■■■□□ 2.16
NME3-203ENST00000563367 WRAP53Q9BUR4 548 aaKnown RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms