RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 NAP1L1P55209 391 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 MAXP61244 160 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 LMNB2Q03252 620 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 PPIDQ08752 370 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 COL9A2Q14055 689 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 HNRNPDQ14103 355 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 FGL2Q14314 439 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 ZNF284Q2VY69 593 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 LRRC73Q5JTD7 316 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 SEL1L3Q68CR1 1132 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 AADACL2Q6P093 401 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 NEK5Q6P3R8 708 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 ZNF662Q6ZS27 426 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 B4GALNT4Q76KP1 1039 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 RFX6Q8HWS3 928 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 CAMK1DQ8IU85 385 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 CNTD1Q8N815 330 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 CCDC112Q8NEF3 446 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 CEP76Q8TAP6 659 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 HCAR2Q8TDS4 363 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 HDAC11Q96DB2 347 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 ECHDC3Q96DC8 303 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 PPP1R16AQ96I34 528 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 SLC6A18Q96N87 628 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 CINPQ9BW66 212 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 MIR1-1HGQ9H1L0 117 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 SUV39H2Q9H5I1 410 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 NOD2Q9HC29 1040 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 SAE1Q9UBE0 346 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 SLC6A14Q9UN76 642 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 PACSIN2Q9UNF0 486 aaPredicted RBP8.64□□□□□ -1.03
UBR1-204ENST00000563239 ITM2BQ9Y287 266 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 HEY1Q9Y5J3 304 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 PLXNA2O75051 1894 aa8.64□□□□□ -1.03
UBR1-204ENST00000563239 RALGAPA1Q6GYQ0 2036 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ANKRD11Q6UB99 2663 aaPredicted RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 A0A1W2PQU0 124 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 A0A1W2PR77 199 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 CCDC66A2RUB6 948 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ARHGAP33O14559 1287 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 TM4SF5O14894 197 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 HTRA2O43464 458 aaPredicted RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 FOXD2O60548 495 aaPredicted RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 CST8O60676 142 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 FTCDO95954 541 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 CFIP05156 583 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 PYGMP11217 842 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ZFXP17010 805 aaPredicted RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 ENGP17813 658 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 MX2P20592 715 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 MAT2AP31153 395 aaKnown RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 PTPN7P35236 360 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 CSNK1EP49674 416 aaKnown RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 SCNN1BP51168 640 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 RENBPP51606 427 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 LIMK1P53667 647 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 AP1S1P61966 158 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 DYNLT1P63172 113 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 RAD51Q06609 339 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 NIPAL4Q0D2K0 466 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ZBTB17Q13105 803 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 PPP2R5EQ16537 467 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 TFDP3Q5H9I0 405 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 STPG1Q5TH74 334 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 MARC1Q5VT66 337 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 KAZNQ674X7 775 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 FBXL19Q6PCT2 694 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 LAYNQ6UX15 382 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 HORMAD1Q86X24 394 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 CCDC13Q8IYE1 715 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 RNF10Q8N5U6 811 aaKnown RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 OR2I1PQ8NGU4 316 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ARRDC2Q8TBH0 407 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 SNX19Q92543 992 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 KLK6Q92876 244 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 RAB7BQ96AH8 199 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 RMDN1Q96DB5 314 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 HES6Q96HZ4 224 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ZNF641Q96N77 438 aaPredicted RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 NUDCD1Q96RS6 583 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 TUBGCP5Q96RT8 1024 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 IL12RB2Q99665 862 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 HEMGNQ9BXL5 484 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 MAK16Q9BXY0 300 aaKnown RBP8.63□□□□□ -1.03
UBR1-204ENST00000563239 KCNF1Q9H3M0 494 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 NT5MQ9NPB1 228 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 DYRK4Q9NR20 520 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 RBM22Q9NW64 420 aaKnown RBP eCLIP8.63□□□□□ -1.03
UBR1-204ENST00000563239 SUSD2Q9UGT4 822 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 CA5BQ9Y2D0 317 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 ATP8A1Q9Y2Q0 1164 aa8.63□□□□□ -1.03
UBR1-204ENST00000563239 CACNA1EQ15878 2313 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 A0A1B0GVT2 93 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 IGLON5A6NGN9 336 aa8.62□□□□□ -1.03
UBR1-204ENST00000563239 PRR5-ARHGAP8B1AHC4 643 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms