RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RGRP47804 291 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 GALNT3Q14435 633 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 CNSTQ6PJW8 725 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 NAPRTQ6XQN6 538 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 C16orf59Q7L2K0 433 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 DNAJB7Q7Z6W7 309 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 CENPLQ8N0S6 344 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 TMEM151AQ8N4L1 468 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 TRIM43Q96BQ3 446 aaPredicted RBP19.29■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF333Q96JL9 665 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 CYP2S1Q96SQ9 504 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 EBF4Q9BQW3 602 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 FAM167BQ9BTA0 163 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 SPG21Q9NZD8 308 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 ARMCX1Q9P291 453 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 STK38LQ9Y2H1 464 aa19.29■□□□□ 0.68
SMPD3-203ENST00000563226 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.28■□□□□ 0.68
SMPD3-203ENST00000563226 MROH6A6NGR9 719 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 TK2O00142 265 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 ATP5HO75947 161 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 SPATA31D3P0C874 917 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 GLRBP48167 497 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 CD151P48509 253 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 RBM20Q5T481 1227 aaKnown RBP19.28■□□□□ 0.68
SMPD3-203ENST00000563226 SPATA31D4Q6ZUB0 917 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 PAWRQ96IZ0 340 aaKnown RBP19.28■□□□□ 0.68
SMPD3-203ENST00000563226 TASP1Q9H6P5 420 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 PNPOQ9NVS9 261 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 TLK1Q9UKI8 766 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 LDB2O43679 373 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 LAG3P18627 525 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 VEPH1Q14D04 833 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 DDX53Q86TM3 631 aaKnown RBP19.28■□□□□ 0.68
SMPD3-203ENST00000563226 SPATA6LQ8N4H0 392 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 GPATCH11Q8N954 259 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 MOCOSQ96EN8 888 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 ELMO2Q96JJ3 720 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 EXOC2Q96KP1 924 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 ZFRQ96KR1 1074 aaKnown RBP19.28■□□□□ 0.68
SMPD3-203ENST00000563226 ZNF599Q96NL3 588 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 UNKQ9C0B0 810 aaKnown RBP19.28■□□□□ 0.68
SMPD3-203ENST00000563226 SAR1AQ9NR31 198 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 ANKRD6Q9Y2G4 727 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 INSL5Q9Y5Q6 135 aa19.28■□□□□ 0.68
SMPD3-203ENST00000563226 OR51F1A6NGY5 319 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 BUD23O43709 281 aaKnown RBP19.27■□□□□ 0.68
SMPD3-203ENST00000563226 CLDN11O75508 207 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 RHOCP08134 193 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 PIRTP0C851 137 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 GRK2P25098 689 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 TAS2R39P59534 338 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 RAB10P61026 200 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 ABCE1P61221 599 aaKnown RBP19.27■□□□□ 0.68
SMPD3-203ENST00000563226 CDK18Q07002 472 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 DLG1Q12959 904 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 PTPRCAPQ14761 206 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 ADGRF1Q5T601 910 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 MAVSQ7Z434 540 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 LDB1Q86U70 411 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-203ENST00000563226 RNF135Q8IUD6 432 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 PIWIL2Q8TC59 973 aaKnown RBP19.27■□□□□ 0.68
SMPD3-203ENST00000563226 PTCD3Q96EY7 689 aaKnown RBP19.27■□□□□ 0.68
SMPD3-203ENST00000563226 IFT43Q96FT9 208 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 NDNQ99608 321 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 MGME1Q9BQP7 344 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 ACE2Q9BYF1 805 aaPredicted RBP19.27■□□□□ 0.68
SMPD3-203ENST00000563226 ACSS2Q9NR19 701 aa19.27■□□□□ 0.68
SMPD3-203ENST00000563226 KDELR3O43731 214 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 PAPSS2O95340 614 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 OXCT1P55809 520 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 SLC12A1Q13621 1099 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 ALG1LQ6GMV1 187 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 PTAR1Q7Z6K3 402 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 CMTR2Q8IYT2 770 aaKnown RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 BLOC1S5Q8TDH9 187 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 HDAC10Q969S8 669 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 FEM1CQ96JP0 617 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 WWP1Q9H0M0 922 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 NOD2Q9HC29 1040 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 UBA2Q9UBT2 640 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 RUVBL2Q9Y230 463 aaKnown RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 TEX28O15482 410 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 TIMP1P01033 207 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 MBL2P11226 248 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 STMN1P16949 149 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 ELF1P32519 619 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 ZXDBP98169 803 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 CXorf57Q6NSI4 855 aaKnown RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 INPP5DQ92835 1189 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 OLFM1Q99784 485 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 OMDQ99983 421 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 MARCH4Q9P2E8 410 aaPredicted RBP19.26■□□□□ 0.67
SMPD3-203ENST00000563226 ARL5AQ9Y689 179 aa19.26■□□□□ 0.67
SMPD3-203ENST00000563226 ANKRD36A6QL64 1941 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.25■□□□□ 0.67
SMPD3-203ENST00000563226 A0A1B0GVM2 712 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 ILVBLA1L0T0 632 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 TCAF2A6NFQ2 919 aa19.25■□□□□ 0.67
SMPD3-203ENST00000563226 ATP6V1G2O95670 118 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms