RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 POLD2P49005 469 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 RASSF2P50749 326 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 EIF5P55010 431 aaKnown RBP5.86□□□□□ -1.47
LINC00557-201ENST00000563184 CDH12P55289 794 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 GRIK3Q13003 919 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 CAPSQ13938 189 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 PTGR1Q14914 329 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 CDC73Q6P1J9 531 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 PARM1Q6UWI2 310 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 NEK10Q6ZWH5 1172 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 TRAPPC11Q7Z392 1133 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 C1QL2Q7Z5L3 287 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 GABPB2Q8TAK5 448 aaPredicted RBP5.86□□□□□ -1.47
LINC00557-201ENST00000563184 ETNPPLQ8TBG4 499 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 VOPP1Q96AW1 172 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 TMEM18Q96B42 140 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 PABPC5Q96DU9 382 aaKnown RBP5.86□□□□□ -1.47
LINC00557-201ENST00000563184 MSTO1Q9BUK6 570 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 C1QTNF7Q9BXJ2 289 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 FOXP1Q9H334 677 aaPredicted RBP5.86□□□□□ -1.47
LINC00557-201ENST00000563184 PLEKHA4Q9H4M7 779 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 SCPEP1Q9HB40 452 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 MAP3K20Q9NYL2 800 aaKnown RBP5.86□□□□□ -1.47
LINC00557-201ENST00000563184 NDRG3Q9UGV2 375 aa5.86□□□□□ -1.47
LINC00557-201ENST00000563184 INTS6Q9UL03 887 aaKnown RBP5.86□□□□□ -1.47
LINC00557-201ENST00000563184 I6L893 689 aaPredicted RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 SNAP23O00161 211 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 SOCS2O14508 198 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 KLK8O60259 260 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 SEC14L2O76054 403 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 HSPA1AP0DMV8 641 aaKnown RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 HSPA1BP0DMV9 641 aaKnown RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 ZNF8P17098 575 aaPredicted RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 BSGP35613 385 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 HDAC4P56524 1084 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 RPL7AP62424 266 aaKnown RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 FAM27E3Q08E93 113 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 TMEM115Q12893 351 aaPredicted RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 RUNX2Q13950 521 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 LPIN1Q14693 890 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 VEPH1Q14D04 833 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 ALG11Q2TAA5 492 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 WASHC2DQ5SRD0 308 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 CTU1Q7Z7A3 348 aaKnown RBP5.85□□□□□ -1.47
LINC00557-201ENST00000563184 NOXA1Q86UR1 476 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 DENND6AQ8IWF6 608 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 NGEFQ8N5V2 710 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 GJC3Q8NFK1 279 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 GPT2Q8TD30 523 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 SNAPC3Q92966 411 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 SLC25A28Q96A46 364 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 ITPAQ9BY32 194 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 ISCUQ9H1K1 167 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 CDT1Q9H211 546 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 MKLN1Q9UL63 735 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 CARD8Q9Y2G2 431 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 A3GALT2U3KPV4 340 aa5.85□□□□□ -1.47
LINC00557-201ENST00000563184 H0YGN5 161 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 LDB2O43679 373 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 LIASO43766 372 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 ATP2C2O75185 946 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 TFP02787 698 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 PSMA4P25789 261 aaKnown RBP5.84□□□□□ -1.47
LINC00557-201ENST00000563184 THPOP40225 353 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 PBX3P40426 434 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 RFX5P48382 616 aaPredicted RBP5.84□□□□□ -1.47
LINC00557-201ENST00000563184 SETQ01105 290 aaPredicted RBP5.84□□□□□ -1.47
LINC00557-201ENST00000563184 TRAF1Q13077 416 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 HIST2H2ACQ16777 129 aaPredicted RBP5.84□□□□□ -1.47
LINC00557-201ENST00000563184 ZNF284Q2VY69 593 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 ESCO2Q56NI9 601 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 PRAMEF19Q5SWL8 479 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 NCAPH2Q6IBW4 605 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 ZNF425Q6IV72 752 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 TDRPQ86YL5 185 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 ADSSL1Q8N142 457 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 TMEM199Q8N511 208 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 TMEM163Q8TC26 289 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 CREB3L4Q8TEY5 395 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 SLC35F5Q8WV83 523 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 INTS12Q96CB8 462 aaKnown RBP5.84□□□□□ -1.47
LINC00557-201ENST00000563184 NLRP4Q96MN2 994 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 BBS4Q96RK4 519 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 H2AFJQ9BTM1 129 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 ANKRD10Q9NXR5 420 aa5.84□□□□□ -1.47
LINC00557-201ENST00000563184 TTC3P53804 2025 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 A0A1W2PQF6 199 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 TYW5A2RUC4 315 aaKnown RBP5.83□□□□□ -1.48
LINC00557-201ENST00000563184 SCGB1D1O95968 90 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 SPARCP09486 303 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 TMEM191BP0C7N4 346 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 PSG1P11464 419 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 LAMP2P13473 410 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 HOXB2P14652 356 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 ITGAXP20702 1163 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 NR4A2P43354 598 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 GNAQP50148 359 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 ZNF81P51508 661 aa5.83□□□□□ -1.48
LINC00557-201ENST00000563184 P2RX3P56373 397 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms