RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 SEPT10Q9P0V9 454 aa17.34■□□□□ 0.37
IRF8-203ENST00000563180 DKK3Q9UBP4 350 aa17.34■□□□□ 0.37
IRF8-203ENST00000563180 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.34■□□□□ 0.37
IRF8-203ENST00000563180 TTLL3Q9Y4R7 772 aa17.34■□□□□ 0.37
IRF8-203ENST00000563180 GPR179Q6PRD1 2367 aa17.34■□□□□ 0.37
IRF8-203ENST00000563180 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.33■□□□□ 0.36
IRF8-203ENST00000563180 HLA-DQB2P05538 268 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 IGHV4-34P06331 123 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 TIMP2P16035 220 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 ABL2P42684 1182 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 IFI35P80217 286 aaPredicted RBP17.33■□□□□ 0.36
IRF8-203ENST00000563180 ZBTB17Q13105 803 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 PRKD1Q15139 912 aaPredicted RBP17.33■□□□□ 0.36
IRF8-203ENST00000563180 FAM182AQ5T1J6 154 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 TTC7BQ86TV6 843 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 SYT12Q8IV01 421 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 PAF1Q8N7H5 531 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 SEMA3CQ99985 751 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 CEP41Q9BYV8 373 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 POLR1EQ9GZS1 481 aaKnown RBP17.33■□□□□ 0.36
IRF8-203ENST00000563180 MIR1-1HGQ9H1L0 117 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 SMOC1Q9H4F8 434 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 PREBQ9HCU5 417 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 TMEM74BQ9NUR3 256 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 HAUS2Q9NVX0 235 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 AMACRQ9UHK6 382 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 EIF2B4Q9UI10 523 aaKnown RBP17.33■□□□□ 0.36
IRF8-203ENST00000563180 PILRBQ9UKJ0 227 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 PYCARDQ9ULZ3 195 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 ATP8A1Q9Y2Q0 1164 aa17.33■□□□□ 0.36
IRF8-203ENST00000563180 GON4LQ3T8J9 2241 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 H7C0C1 242 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 RNGTTO60942 597 aaKnown RBP17.32■□□□□ 0.36
IRF8-203ENST00000563180 PCDH8O95206 1070 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 XPAP23025 273 aaPredicted RBP17.32■□□□□ 0.36
IRF8-203ENST00000563180 ATP5OP48047 213 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 CCR5P51681 352 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 PPP2CBP62714 309 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 PPP2CAP67775 309 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 OTUD4Q01804 1114 aaKnown RBP17.32■□□□□ 0.36
IRF8-203ENST00000563180 DSC2Q02487 901 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 NOMO1Q15155 1222 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 RALGPS1Q5JS13 557 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 LRRC73Q5JTD7 316 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 CFAP58Q5T655 872 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 SEL1L2Q5TEA6 688 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 CNTD1Q8N815 330 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 ACTL9Q8TC94 416 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 HCAR2Q8TDS4 363 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 DNASE2BQ8WZ79 361 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 RAB7BQ96AH8 199 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 PARD6AQ9NPB6 346 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 VPS45Q9NRW7 570 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 PCDHGC4Q9Y5F7 938 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 FADS3Q9Y5Q0 445 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
IRF8-203ENST00000563180 MYO15AQ9UKN7 3530 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 TSPAN11A1L157 253 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 HACD1B0YJ81 288 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 KCNK3O14649 394 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 LRP3O75074 770 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 ITIH2P19823 946 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 MAT2AP31153 395 aaKnown RBP17.31■□□□□ 0.36
IRF8-203ENST00000563180 DPP6P42658 865 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 NIPAL4Q0D2K0 466 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 XRCC4Q13426 336 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 PLA2G2CQ5R387 149 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 BRAT1Q6PJG6 821 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 AGAP3Q96P47 875 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 QKIQ96PU8 341 aaKnown RBP eCLIP17.31■□□□□ 0.36
IRF8-203ENST00000563180 FAM118BQ9BPY3 351 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 TLR10Q9BXR5 811 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 C10orf88Q9H8K7 445 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 SEMA4GQ9NTN9 838 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 DMDP11532 3685 aa17.31■□□□□ 0.36
IRF8-203ENST00000563180 DOCK9Q9BZ29 2069 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 A0A1W2PQU0 124 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 TCRBV7S2A1N4TA0A589 114 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 GOLGA6L9A6NEM1 432 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 USP27XA6NNY8 438 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 PATE3B3GLJ2 98 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 C10orf142B7Z368 130 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 NEMP1O14524 444 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 TRAFD1O14545 582 aaPredicted RBP17.3■□□□□ 0.36
IRF8-203ENST00000563180 AP1G1O43747 822 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 TGM1P22735 817 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 CES1P23141 567 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 PTPN3P26045 913 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 CD27P26842 260 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 EIF3EP60228 445 aaKnown RBP17.3■□□□□ 0.36
IRF8-203ENST00000563180 UGP2Q16851 508 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 SLC45A4Q5BKX6 768 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 ZNF569Q5MCW4 686 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 PEAR1Q5VY43 1037 aaPredicted RBP17.3■□□□□ 0.36
IRF8-203ENST00000563180 ALG1LQ6GMV1 187 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 NEK5Q6P3R8 708 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 TRIM69Q86WT6 500 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 ZSWIM9Q86XI8 627 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 ARRDC2Q8TBH0 407 aa17.3■□□□□ 0.36
IRF8-203ENST00000563180 PDCD6IPQ8WUM4 868 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms