RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 INHBCP55103 352 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 PSME3P61289 254 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 TRIM25Q14258 630 aaKnown RBP13.21□□□□□ -0.29
USB1-207ENST00000563149 SLC14A2Q15849 920 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 TECRLQ5HYJ1 363 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
USB1-207ENST00000563149 KLC3Q6P597 504 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 RANBP10Q6VN20 620 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 HACD2Q6Y1H2 254 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 SATL1Q86VE3 508 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 SPATA24Q86W54 205 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 LILRA2Q8N149 483 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 TXNDC5Q8NBS9 432 aaKnown RBP13.21□□□□□ -0.29
USB1-207ENST00000563149 SPPL2BQ8TCT7 592 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 HEXDCQ8WVB3 486 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 MS4A4AQ96JQ5 239 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 RANBP9Q96S59 729 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 PKP2Q99959 881 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 TRMOQ9BU70 441 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 ARNT2Q9HBZ2 717 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 TMEM30AQ9NV96 361 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 LZTS1Q9Y250 596 aa13.21□□□□□ -0.29
USB1-207ENST00000563149 PDLIM1O00151 329 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 IRAK2O43187 625 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 MT-CYBP00156 380 aaPredicted RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 JUNP05412 331 aaKnown RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 CPB1P15086 417 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 RABGGTBP53611 331 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 INHBEP58166 350 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 NRG1Q02297 640 aaPredicted RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 LRP8Q14114 963 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 SLC5A9Q2M3M2 681 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 NEPROQ6NW34 567 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 FAM171BQ6P995 826 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 BORAQ6PGQ7 559 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 TLK2Q86UE8 772 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 MFSD6LQ8IWD5 586 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 MYLPFQ96A32 169 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 TMA16Q96EY4 203 aaKnown RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 NPAS2Q99743 824 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 SLC2A11Q9BYW1 496 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 CHST12Q9NRB3 414 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 ABCC13Q9NSE7 274 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 IGSF5Q9NSI5 407 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 GTSE1Q9NYZ3 720 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 UBAP1Q9NZ09 502 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 Q9Y3F1 56 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 PCDHGA7Q9Y5G6 932 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 CCL15-CCL14A0A0B4J2E2 113 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 CCDC78A2IDD5 438 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 HEATR9A2RTY3 570 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 KLHL33A6NCF5 533 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 WASH4PA8MWX3 477 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 UBDO15205 165 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 IPO13O94829 963 aaKnown RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 PAPSS2O95340 614 aaPredicted RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 ODC1P11926 461 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 HOXC8P31273 242 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 SLC26A3P40879 764 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 LEPRP48357 1165 aaKnown RBP13.2□□□□□ -0.3
USB1-207ENST00000563149 CLCNKBP51801 687 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 RHDQ02161 417 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 SULT2A1Q06520 285 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 ZNF460Q14592 562 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 ACAP2Q15057 778 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 CCL15Q16663 113 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 FAM110CQ1W6H9 321 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 AFMIDQ63HM1 303 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 CNSTQ6PJW8 725 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 ARHGAP36Q6ZRI8 547 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 FATE1Q969F0 183 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 KLHL32Q96NJ5 620 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 NDNQ99608 321 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 OMDQ99983 421 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 FSD1LQ9BXM9 530 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 TRPV6Q9H1D0 765 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 FAM105AQ9NUU6 356 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 RBM22Q9NW64 420 aaKnown RBP eCLIP13.2□□□□□ -0.3
USB1-207ENST00000563149 RNF181Q9P0P0 153 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 AP4S1Q9Y587 144 aa13.2□□□□□ -0.3
USB1-207ENST00000563149 PSMD12O00232 456 aaPredicted RBP13.19□□□□□ -0.3
USB1-207ENST00000563149 TRIM24O15164 1050 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 GPC4O75487 556 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 CYP11A1P05108 521 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 CCR1P32246 355 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 ZNF470Q6ECI4 717 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 FAM45BPQ6NSW5 357 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 TAF2Q6P1X5 1199 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
USB1-207ENST00000563149 GK5Q6ZS86 529 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms