RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	ZMYM2	Q9UBW7	1377 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235		A0A096LPK6	155 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	EBAG9	O00559	213 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	LIAS	O43766	372 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	KIF1C	O43896	1103 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	TIPRL	O75663	272 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	CLDN7	O95471	211 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SCGB1D1	O95968	90 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	LDHC	P07864	332 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	LAMP2	P13473	410 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	NFKBIA	P25963	317 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	CD38	P28907	300 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	RYK	P34925	604 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	BSG	P35613	385 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	ARL3	P36405	182 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	CENPA	P49450	140 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	GNAQ	P50148	359 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	DRG2	P55039	364 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	ARF3	P61204	181 aa	Predicted RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	ARF1	P84077	181 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	CAPS	Q13938	189 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	EIF4A2	Q14240	407 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	PPP2R5B	Q15173	497 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	RNPS1	Q15287	305 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	INPP5J	Q15735	1006 aa	Predicted RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	EZH2	Q15910	746 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	C10orf25	Q5T742	122 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	TXNDC8	Q6A555	127 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	CES5A	Q6NT32	575 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	CREB3L4	Q8TEY5	395 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	TMEM174	Q8WUU8	243 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	INTS12	Q96CB8	462 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	PABPC5	Q96DU9	382 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	BBS4	Q96RK4	519 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	YME1L1	Q96TA2	773 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SLITRK6	Q9H5Y7	841 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	MVB12B	Q9H7P6	319 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SCPEP1	Q9HB40	452 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SPATS2L	Q9NUQ6	558 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SEPT11	Q9NVA2	429 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	TRNAU1AP	Q9NX07	287 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	HEY2	Q9UBP5	337 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SWAP70	Q9UH65	585 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	LIMA1	Q9UHB6	759 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	PCDHA12	Q9UN75	941 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	LAS1L	Q9Y4W2	734 aa	Known RBP	5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	KCNE2	Q9Y6J6	123 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	SLC4A4	Q9Y6R1	1079 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	GRIN2A	Q12879	1464 aa		5.69	□□□□□ -1.5
TCF12-223	ENST00000561235	GLI2	P10070	1586 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	ANKRD18B	A2A2Z9	1011 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	DYTN	A2CJ06	578 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	TYW5	A2RUC4	315 aa	Known RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	HSPB2	A8KAH6	182 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	KLRF2	D3W0D1	207 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	NPIPB11	E5RHQ5	1161 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	STMND1	H3BQB6	276 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	ATP2C2	O75185	946 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	MLYCD	O95822	493 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	ACADM	P11310	421 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	PTPN2	P17706	415 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	PSMA4	P25789	261 aa	Known RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	MLH1	P40692	756 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	GPR12	P47775	334 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	CXCR3	P49682	368 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	OLR1	P78380	273 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	CEBPZ	Q03701	1054 aa	Known RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	GRIK3	Q13003	919 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	MAMLD1	Q13495	774 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	HSPB2	Q16082	182 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	GSTA3	Q16772	222 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	SHC4	Q6S5L8	630 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	CYP20A1	Q6UW02	462 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	TMC8	Q8IU68	726 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	ZDHHC23	Q8IYP9	409 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	PDILT	Q8N807	584 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	ZMIZ2	Q8NF64	920 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	USP6NL	Q92738	828 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	COQ8B	Q96D53	544 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	RNF183	Q96D59	192 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	TREX2	Q9BQ50	279 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	POLDIP3	Q9BY77	421 aa	Known RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	EIF2B3	Q9NR50	452 aa	Known RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	CORO1C	Q9ULV4	474 aa	Predicted RBP	5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	ADAMTSL3	P82987	1691 aa		5.68	□□□□□ -1.5
TCF12-223	ENST00000561235	KIF21B	O75037	1637 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	PRG4	Q92954	1404 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	FAM237B	A0A1B0GVD1	139 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235		A6NCN8	305 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	LRRC53	A6NM62	1247 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	ZNF8	P17098	575 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	SRD5A1	P18405	259 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	PPP3CC	P48454	512 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	HSPA2	P54652	639 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	HDAC4	P56524	1084 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	FOXD4	Q12950	439 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	TRIP6	Q15654	476 aa	Known RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	ALG11	Q2TAA5	492 aa		5.67	□□□□□ -1.5
TCF12-223	ENST00000561235	EPHA10	Q5JZY3	1008 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms