RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 IGHV4-34P06331 123 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 KRT10P13645 584 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 CCNB1P14635 433 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 TIMP2P16035 220 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 SERPINA4P29622 427 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 GARSP41250 739 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 MMP13P45452 471 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 CSNK1DP48730 415 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 AFF3P51826 1226 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 MAXP61244 160 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 POLR2LP62875 67 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 FAM193AP78312 1265 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 GBE1Q04446 702 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 SLC10A2Q12908 348 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 TFDP2Q14188 446 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 SETMARQ53H47 684 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 PIP5KL1Q5T9C9 394 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 STPG1Q5TH74 334 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 AGBL4Q5VU57 503 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 C11orf63Q6NUN7 778 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 NEK5Q6P3R8 708 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 MFSD7Q6UXD7 560 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 NPNTQ6UXI9 565 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 SPOCD1Q6ZMY3 1216 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 BZW1Q7L1Q6 419 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 PEX26Q7Z412 305 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 CAMK1DQ8IU85 385 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 LRRC8AQ8IWT6 810 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 SYCE1Q8N0S2 351 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 PQLC3Q8N755 202 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 CCDC112Q8NEF3 446 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 RAB7BQ96AH8 199 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 RBM41Q96IZ5 413 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 ZNF641Q96N77 438 aaPredicted RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 MYOCQ99972 504 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 HEMGNQ9BXL5 484 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 CPEB1Q9BZB8 566 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 PREBQ9HCU5 417 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 TM9SF3Q9HD45 589 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 RXFP3Q9NSD7 469 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 RBM22Q9NW64 420 aaKnown RBP eCLIP9.13□□□□□ -0.953e-9■■■■■ 38.6
SNRPA1-214ENST00000560987 SEPT10Q9P0V9 454 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 TRIM10Q9UDY6 481 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 TPX2Q9ULW0 747 aaKnown RBP9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 GUCA1BQ9UMX6 200 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 PCDHA3Q9Y5H8 950 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 PLXND1Q9Y4D7 1925 aa9.13□□□□□ -0.95
SNRPA1-214ENST00000560987 CHD5Q8TDI0 1954 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 SHROOM3Q8TF72 1996 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 A0A1B0GVT2 93 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 LNP1A1A4G5 178 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 IGLON5A6NGN9 336 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 C3orf70A6NLC5 250 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 A8MX80 341 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 ZNF487B1APH4 448 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PRAMEF26H0Y7S4 382 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 KCNK3O14649 394 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PPP1R12AO14974 1030 aaPredicted RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 MATN3O15232 486 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 ARHGAP6O43182 974 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 TSPAN6O43657 245 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 CST8O60676 142 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 JCHAINP01591 159 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PRLRP16471 622 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 ITIH2P19823 946 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 CD38P28907 300 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 AKT2P31751 481 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 HSPA9P38646 679 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 RGRP47804 291 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 RWDD2BP57060 319 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 TAS2R38P59533 333 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PPP2CBP62714 309 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 RPS21P63220 83 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 RACK1P63244 317 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PPP2CAP67775 309 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 GALNT2Q10471 571 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 HNRNPDQ14103 355 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PDK1Q15118 436 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 TFDP3Q5H9I0 405 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 LRRC73Q5JTD7 316 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 ERAP2Q6P179 960 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 B4GALNT4Q76KP1 1039 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PARS2Q7L3T8 475 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 HORMAD1Q86X24 394 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 CCDC13Q8IYE1 715 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 KATNAL2Q8IYT4 538 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 UBL4BQ8N7F7 174 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PLD5Q8N7P1 536 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 CXorf40AQ8TE69 158 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 P3H4Q92791 437 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 FAF2Q96CS3 445 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 TSGA13Q96PP4 275 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 PSKH2Q96QS6 385 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 TUBGCP5Q96RT8 1024 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 LGMNQ99538 433 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 WRAP53Q9BUR4 548 aaKnown RBP9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 SLC17A9Q9BYT1 436 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 TSGA10Q9BZW7 698 aa9.12□□□□□ -0.95
SNRPA1-214ENST00000560987 ZDHHC5Q9C0B5 715 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms