RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SDHBP21912 280 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 CCNCP24863 283 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 NUDT1P36639 197 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 MAPK8P45983 427 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 RENBPP51606 427 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 HNRNPDQ14103 355 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 FGL2Q14314 439 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 GRM3Q14832 879 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 IFI16Q16666 785 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 KIF19Q2TAC6 998 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 SEL1L3Q68CR1 1132 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 PRPF39Q86UA1 669 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 KATNAL2Q8IYT4 538 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 LRRN4Q8WUT4 740 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 RAB7BQ96AH8 199 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 ECHDC3Q96DC8 303 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 CALR3Q96L12 384 aaKnown RBP15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 ZNF641Q96N77 438 aaPredicted RBP15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 TUBGCP5Q96RT8 1024 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 MGME1Q9BQP7 344 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 ZDHHC5Q9C0B5 715 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 TRIM10Q9UDY6 481 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 GGT7Q9UJ14 662 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 DMTF1Q9Y222 760 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 ITM2BQ9Y287 266 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 PCNX2A6NKB5 2137 aa15.44■□□□□ 0.06
SNRPA1-213ENST00000560856 TRAFD1O14545 582 aaPredicted RBP15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 VILLO15195 856 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 MATN3O15232 486 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 PCDH8O95206 1070 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 HSPA9P38646 679 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 SCNN1BP51168 640 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 AP1S1P61966 158 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 ADCY2Q08462 1091 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 IHHQ14623 411 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 MARC1Q5VT66 337 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 NAPEPLDQ6IQ20 393 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 NPNTQ6UXI9 565 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 SPOCD1Q6ZMY3 1216 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 DAAM2Q86T65 1068 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 KIAA1328Q86T90 577 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 TTC7BQ86TV6 843 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 MINDY1Q8N5J2 469 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 TMEM145Q8NBT3 493 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 KLK6Q92876 244 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 HDAC11Q96DB2 347 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 FEM1CQ96JP0 617 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 SERAC1Q96JX3 654 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 OLFM3Q96PB7 478 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 NUDCD1Q96RS6 583 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 NOD2Q9HC29 1040 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 DNAAF2Q9NVR5 837 aaKnown RBP15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 ANKRD6Q9Y2G4 727 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 ADGRG1Q9Y653 693 aa15.43■□□□□ 0.06
SNRPA1-213ENST00000560856 DCDC2BA2VCK2 349 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 GOLGA6L6A8MZA4 724 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 APOL1O14791 398 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 SLC31A1O15431 190 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 TSPAN6O43657 245 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 KRT10P13645 584 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 PRLRP16471 622 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 MX2P20592 715 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 CD38P28907 300 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 CTNNA1P35221 906 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 CTSKP43235 329 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 MMP13P45452 471 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 PEX5P50542 639 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 MAXP61244 160 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 ZNF235Q14590 738 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 UGP2Q16851 508 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 SETMARQ53H47 684 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 LRRC73Q5JTD7 316 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 ALG1LQ6GMV1 187 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 KIAA1161Q6NSJ0 714 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 RCOR2Q8IZ40 523 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 EXD1Q8NHP7 514 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 SPOCK2Q92563 424 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 LGMNQ99538 433 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 GTPBP2Q9BX10 602 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 C1QTNF2Q9BXJ5 285 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 ATP13A3Q9H7F0 1226 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 GRPEL1Q9HAV7 217 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 IL21RQ9HBE5 538 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 CA5BQ9Y2D0 317 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 PCDHA3Q9Y5H8 950 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 SNX11Q9Y5W9 270 aa15.42■□□□□ 0.06
SNRPA1-213ENST00000560856 hCG_1818297A0A087WSY0 165 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 IGLON5A6NGN9 336 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 PRAMEF26H0Y7S4 382 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 HTRA2O43464 458 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 ZRANB2O95218 330 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 CD59P13987 128 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 ZFXP17010 805 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 CTNNA2P26232 953 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 SUOXP51687 545 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 RPS21P63220 83 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 PPIDQ08752 370 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 LLGL1Q15334 1064 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 TEAD4Q15561 434 aa15.41■□□□□ 0.06
SNRPA1-213ENST00000560856 HLA-BQ31612 363 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms