RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 EPAS1Q99814 870 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 AGPAT1Q99943 283 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 LRRC61Q9BV99 259 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 DUSP23Q9BVJ7 150 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 TTYH3Q9C0H2 523 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 PRORYQ9H606 182 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 LRRC19Q9H756 370 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 MBNL1Q9NR56 388 aaKnown RBP10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 ANO10Q9NW15 660 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 TAS2R14Q9NYV8 317 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 APOBEC3BQ9UH17 382 aaKnown RBP10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 METRNQ9UJH8 293 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 MFHAS1Q9Y4C4 1052 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 AK5Q9Y6K8 562 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 RP1P56715 2156 aa10.28□□□□□ -0.76
SNRPA1-212ENST00000560496 KIF26BQ2KJY2 2108 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 A0A1W2PNU3 283 aaPredicted RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 RASA4BC9J798 803 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 H3BM21 787 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 ATMINO43313 823 aaPredicted RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 RASA4O43374 803 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 BUB1O43683 1085 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 CREB3O43889 395 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 POP4O95707 220 aaKnown RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 ATP1A3P13637 1013 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 JUNDP17535 347 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 ITIH2P19823 946 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 PDX1P52945 283 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 AIF1P55008 147 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 YBEYP58557 167 aaPredicted RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 E2F1Q01094 437 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 UBXN1Q04323 297 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 IRF4Q15306 451 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 PARP15Q460N3 678 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 HS1BP3Q53T59 392 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 INO80DQ53TQ3 878 aaPredicted RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 LCE2DQ5TA82 110 aaPredicted RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 E4F1Q66K89 784 aaPredicted RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 MACC1Q6ZN28 852 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 VPS36Q86VN1 386 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 ZSWIM9Q86XI8 627 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 PHACTR4Q8IZ21 702 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 MCOLN2Q8IZK6 566 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 UMODL1-AS1Q8N2C9 162 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 AOPEPQ8N6M6 819 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 SLC39A7Q92504 469 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 ARHGEF26Q96DR7 871 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 HIC2Q96JB3 615 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 TBATAQ96M53 351 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 PEBP4Q96S96 227 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 CNPY3Q9BT09 278 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 ASCL3Q9NQ33 180 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 SEPT11Q9NVA2 429 aaKnown RBP10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 GPATCH2LQ9NWQ4 482 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 DKK3Q9UBP4 350 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 HPCAL4Q9UM19 191 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 COQ6Q9Y2Z9 468 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 CSNK1G3Q9Y6M4 447 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 BOD1L1Q8NFC6 3051 aa10.27□□□□□ -0.77
SNRPA1-212ENST00000560496 KNTC1P50748 2209 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 EME2A4GXA9 379 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 NEMP2A6NFY4 417 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 LRRC10BA6NIK2 292 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 NEMP1O14524 444 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 FGF10O15520 208 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 MMP20O60882 483 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 GCATO75600 419 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 MPOP05164 745 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CELA2BP08218 269 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 TGM2P21980 687 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 MMP12P39900 470 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 RGRP47804 291 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 SGCGQ13326 291 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CYTH1Q15438 398 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CDKN3Q16667 212 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CA9Q16790 459 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 KLHL40Q2TBA0 621 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 PERM1Q5SV97 790 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 C6orf132Q5T0Z8 1188 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 ACAD10Q6JQN1 1059 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 SCYL2Q6P3W7 929 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 NYAP1Q6ZVC0 841 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 IRF2BP2Q7Z5L9 587 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 ZNF354CQ86Y25 554 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 DNAAF5Q86Y56 855 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 ARHGAP12Q8IWW6 846 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 SLC35F3Q8IY50 421 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 ARFGAP1Q8N6T3 406 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 NPWQ8N729 165 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 LMX1AQ8TE12 382 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 CXorf40AQ8TE69 158 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 PCMTD1Q96MG8 357 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 DEPDC7Q96QD5 511 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 WRAP53Q9BUR4 548 aaKnown RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 SNRNP25Q9BV90 132 aaKnown RBP10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 BOCQ9BWV1 1114 aa10.26□□□□□ -0.77
SNRPA1-212ENST00000560496 TRIM7Q9C029 511 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms