RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 HJURPQ8NCD3 748 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SRPK1Q96SB4 655 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 DDX50Q9BQ39 737 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 PBX4Q9BYU1 374 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 SENP1Q9P0U3 644 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 VPS51Q9UID3 782 aa10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 FNDC3AQ9Y2H6 1198 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-211ENST00000560433 NEDD8-MDP1E9PL57 170 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 HGSO14964 777 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 INSIG1O15503 277 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 SERPINF2P08697 491 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 CEBPBP17676 345 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 WEE1P30291 646 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 CTSOP43234 321 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 CDK18Q07002 472 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 LMAN2Q12907 356 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 MSLNQ13421 630 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 LGSNQ5TDP6 509 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 FSTL4Q6MZW2 842 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 PTAR1Q7Z6K3 402 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 RMDN1Q96DB5 314 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 PSKH2Q96QS6 385 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 MGME1Q9BQP7 344 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 UNKQ9C0B0 810 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 NKX2-4Q9H2Z4 354 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 PIDD1Q9HB75 910 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 SCUBE2Q9NQ36 999 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 SEPT3Q9UH03 358 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 GGT7Q9UJ14 662 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 SMG5Q9UPR3 1016 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ANKRD36A6QL64 1941 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 MAGEB16A2A368 324 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 CCDC85CA6NKD9 419 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 DNAJC6O75061 913 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ZMPSTE24O75844 475 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 TAC1P20366 129 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 GABRB3P28472 473 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 STK19P49842 368 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ARSDP51689 593 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 IL9RQ01113 521 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 SLC18A2Q05940 514 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF789Q5FWF6 425 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ARID3BQ8IVW6 561 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 DCLK2Q8N568 766 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ARMC2Q8NEN0 867 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 OR13C4Q8NGS5 318 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 PTPRN2Q92932 1015 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ALG14Q96F25 216 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 SGSM3Q96HU1 749 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 APOPT1Q96IL0 206 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 VPS11Q9H270 941 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 TNKS2Q9H2K2 1166 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 VPS45Q9NRW7 570 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 ABCB8Q9NUT2 735 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 TDP1Q9NUW8 608 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 INTS6Q9UL03 887 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 OR51B4Q9Y5P0 310 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 WNT6Q9Y6F9 365 aa10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-211ENST00000560433 LOC285095A0A1B0GVY8 99 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 GFRA2O00451 464 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 AHSGP02765 367 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 PRSS56P0CW18 603 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 TYK2P29597 1187 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 GP5P40197 560 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 ARCN1P48444 511 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 NEK3P51956 506 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 IRF9Q00978 393 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 PDE1CQ14123 709 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF460Q14592 562 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 TRIM68Q6AZZ1 485 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 CYS1Q717R9 158 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 OR13J1Q8NGT2 312 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF707Q96C28 371 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 LRRC3BQ96PB8 259 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 RBBP8Q99708 897 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 IQCGQ9H095 443 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 RWDD3Q9Y3V2 267 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 GOLGA8CPA6NN73 597 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 HLA-FP30511 346 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 SLC1A2P43004 574 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 UBE3AQ05086 875 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 GRM3Q14832 879 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 FYB2Q5VWT5 728 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 ZNF470Q6ECI4 717 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 PLD6Q8N2A8 252 aaKnown RBP10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 BBS5Q8N3I7 341 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 SPATA6LQ8N4H0 392 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 OTUD6BQ8N6M0 293 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 LPCAT1Q8NF37 534 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 VN1R2Q8NFZ6 395 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 OR6P1Q8NGX9 317 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 FATE1Q969F0 183 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 TADA1Q96BN2 335 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 MAGEB18Q96M61 343 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 CPNE1Q99829 537 aa10.97□□□□□ -0.65
SNRPA1-211ENST00000560433 TASP1Q9H6P5 420 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms