RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ZACNQ401N2 412 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 FASTKD1Q53R41 847 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ANKRD39Q53RE8 183 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 C6orf52Q5T4I8 152 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 INTS11Q5TA45 600 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CES4AQ5XG92 561 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SLFN13Q68D06 897 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GTF2IRD2BQ6EKJ0 949 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SNRNP48Q6IEG0 339 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC2A7Q6PXP3 512 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 EPGNQ6UW88 154 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MAMDC4Q6UXC1 1216 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 USP53Q70EK8 1073 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 KRT27Q7Z3Y8 459 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GTF2IRD2Q86UP8 949 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CLVS1Q8IUQ0 354 aaPredicted RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 KSR1Q8IVT5 923 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 NDUFAF2Q8N183 169 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GPD1LQ8N335 351 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 FIBCD1Q8N539 461 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SAMD3Q8N6K7 520 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PPM1NQ8N819 430 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SMG8Q8ND04 991 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 GSDMBQ8TAX9 411 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TAS1R2Q8TE23 839 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CPA5Q8WXQ8 436 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 USP6NLQ92738 828 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 USP7Q93009 1102 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 C12orf43Q96C57 262 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CCDC124Q96CT7 223 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ASB9Q96DX5 294 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ASIC4Q96FT7 647 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MRGPRX3Q96LB0 322 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MAGEB10Q96LZ2 347 aaPredicted RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ZDHHC15Q96MV8 337 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SORT1Q99523 831 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 P2RX7Q99572 595 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CTRCQ99895 268 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PKP2Q99959 881 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 FAM118BQ9BPY3 351 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 BCL7BQ9BQE9 202 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 LXNQ9BS40 222 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 EFHD1Q9BUP0 239 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MECRQ9BV79 373 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 APOL6Q9BWW8 343 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MROQ9BYG7 248 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 IMPG2Q9BZV3 1241 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PAIP1Q9H074 479 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CDH19Q9H159 772 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 DEFB129Q9H1M3 183 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 VPS33BQ9H267 617 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PCIF1Q9H4Z3 704 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF385DQ9H6B1 395 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 BCAS3Q9H6U6 928 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 RPF2Q9H7B2 306 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CYP4F11Q9HBI6 524 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 MOV10Q9HCE1 1003 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TRIM39Q9HCM9 518 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CD320Q9NPF0 282 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 ANKEF1Q9NU02 776 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 RIC8BQ9NVN3 520 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PCOLCE2Q9UKZ9 415 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SARDHQ9UL12 918 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 CCPG1Q9ULG6 757 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 AGTPBP1Q9UPW5 1226 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TDRKHQ9Y2W6 561 aaKnown RBP6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 EMC9Q9Y3B6 208 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 DAGLAQ9Y4D2 1042 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TRAF6Q9Y4K3 522 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 PCDHA11Q9Y5I1 949 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SNX9Q9Y5X1 595 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 SSC5DA1L4H1 1573 aa6.04□□□□□ -1.44
SNRPA1-209ENST00000560307 COL2A1P02458 1487 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CCDC195A0A1B0GUA6 201 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TCRBV7S3A2A0A539 114 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MEGF11A6BM72 1044 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 WTIPA6NIX2 430 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 PI4K2BG5E9Z4 385 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GOLGA8SH3BPF8 625 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GOLGA8MH3BSY2 632 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 K7EPI3 171 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ACOT8O14734 319 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC22A1O15245 554 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SHOXO15266 292 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 AQP9O43315 295 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TPD52L2O43399 206 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CST8O60676 142 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 DNAJB5O75953 348 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ALDH1A2O94788 518 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ENDOD1O94919 500 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ZBTB11O95625 1053 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GSRP00390 522 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 FUCA1P04066 466 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 NTRK1P04629 796 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 APOA4P06727 396 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 HSPA1AP0DMV8 641 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 HSPA1BP0DMV9 641 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 KITP10721 976 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms