RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 TDRD1Q9BXT4 1180 aaKnown RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 IL22Q9GZX6 179 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 PCDHGC4Q9Y5F7 938 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 RAI2Q9Y5P3 530 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 TCF20Q9UGU0 1960 aaKnown RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 ACSL3O95573 720 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 APODP05090 189 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 ASGR2P07307 311 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 ATXN1LP0C7T5 689 aaKnown RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 TSHRP16473 764 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 HLA-DPA1P20036 260 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 CRADDP78560 199 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 TFF2Q03403 129 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 CARD16Q5EG05 197 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 SIRPB2Q5JXA9 342 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 CERCAMQ5T4B2 595 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 CFAP58Q5T655 872 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 OR6K2Q8NGY2 324 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 DNASE1L2Q92874 299 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 VOPP1Q96AW1 172 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 FBRSL1Q9HCM7 1045 aaKnown RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 SYBUQ9NX95 663 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 HECAQ9UBI9 543 aaPredicted RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
HERC1-205ENST00000559886 SLC8A2Q9UPR5 921 aa12.31□□□□□ -0.44
HERC1-205ENST00000559886 TTC34A8MYJ7 566 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 NDST3O95803 873 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 CPP00450 1065 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 PRLP01236 227 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 IL9P15248 144 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 TPH1P17752 444 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 CTHP32929 405 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 GALK1P51570 392 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 GPX6P59796 221 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 ST8SIA6P61647 398 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 TRAF2Q12933 501 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 MYLK3Q32MK0 819 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 ALS2CLQ60I27 953 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 DENND2CQ68D51 928 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 NUDT18Q6ZVK8 323 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 Q6ZVU0 165 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 PALM2Q8IXS6 379 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 SLC25A41Q8N5S1 370 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 OR2A12Q8NGT7 310 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 UCMAQ8WVF2 138 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 STAMBPL1Q96FJ0 436 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 P2RY13Q9BPV8 354 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 CPEB1Q9BZB8 566 aaKnown RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 ZC3H7BQ9UGR2 993 aaKnown RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 CHKBQ9Y259 395 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 LOC730098B7Z3J9 87 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 POP4O95707 220 aaKnown RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 FGF1P05230 155 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 ABHD2P08910 425 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 NUDT17P0C025 328 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 CA4P22748 312 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 CCNHP51946 323 aaPredicted RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 MSLNQ13421 630 aaPredicted RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 DPY19L3Q6ZPD9 716 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 RALGPS2Q86X27 583 aaPredicted RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 MAFAQ8NHW3 353 aaPredicted RBP12.3□□□□□ -0.44
HERC1-205ENST00000559886 TUBGCP5Q96RT8 1024 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 ATP13A3Q9H7F0 1226 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 PLAC1Q9HBJ0 212 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 STARD13Q9Y3M8 1113 aa12.3□□□□□ -0.44
HERC1-205ENST00000559886 MAGEB16A2A368 324 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 WASH3PC4AMC7 463 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 TRAFD1O14545 582 aaPredicted RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 FZD6O60353 706 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 SOCS5O75159 536 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 PDHA1P08559 390 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 SSTR1P30872 391 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 BCL2L1Q07817 233 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 ARMC3Q5W041 872 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 C3orf62Q6ZUJ4 267 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 CAMK1DQ8IU85 385 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 RYBPQ8N488 228 aaPredicted RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 ZIM3Q96PE6 472 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 TMEM245Q9H330 911 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 C8orf33Q9H7E9 229 aaPredicted RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 PRDM6Q9NQX0 595 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 SAMD15Q9P1V8 674 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 HCN2Q9UL51 889 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 NFS1Q9Y697 457 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 ATG2BQ96BY7 2078 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 HTRA2O43464 458 aaPredicted RBP12.29□□□□□ -0.44
HERC1-205ENST00000559886 SPAG6O75602 509 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 ALADP13716 330 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 PGAM1P18669 254 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 GKP32189 559 aa12.29□□□□□ -0.44
HERC1-205ENST00000559886 TNFRSF4P43489 277 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms