RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GALNT3Q14435 633 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SLC14A2Q15849 920 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 HNRNPA1L2Q32P51 320 aaKnown RBP10.54□□□□□ -0.72
TPM1-221ENST00000559831 BBS9Q3SYG4 887 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 CFAP58Q5T655 872 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 NAPEPLDQ6IQ20 393 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SDE2Q6IQ49 451 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 LINC00523Q86TU6 105 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 CAMK1DQ8IU85 385 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 UBALD2Q8IYN6 164 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SIX5Q8N196 739 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 ZCCHC9Q8N567 271 aaKnown RBP10.54□□□□□ -0.72
TPM1-221ENST00000559831 DNAAF3Q8N9W5 541 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 MCUQ8NE86 351 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 LPCAT1Q8NF37 534 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 OR52K1Q8NGK4 314 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 OR2A12Q8NGT7 310 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 OR8D1Q8WZ84 308 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 PTPRN2Q92932 1015 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 TADA1Q96BN2 335 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 FMO2Q99518 471 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 HEPHQ9BQS7 1158 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 FAM129AQ9BZQ8 928 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 TMEM245Q9H330 911 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 ATP13A3Q9H7F0 1226 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 WNT16Q9UBV4 365 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 SUN2Q9UH99 717 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 IL36AQ9UHA7 158 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 RAB21Q9UL25 225 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 CHKBQ9Y259 395 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 PCDHGC4Q9Y5F7 938 aa10.54□□□□□ -0.72
TPM1-221ENST00000559831 KRBA1A5PL33 1030 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 NPC1O15118 1278 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 SYNCRIPO60506 623 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 AVILO75366 819 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 BANF1O75531 89 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 SUN1O94901 812 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 UGT2B4P06133 528 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 TUBBP07437 444 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 FAM153BP0C7A2 387 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 NTSR1P30989 418 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 ADRA1AP35348 466 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 CHRNA4P43681 627 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 CDK16Q00536 496 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 CDK18Q07002 472 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 UBXN2BQ14CS0 331 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 HIF1AQ16665 826 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 POM121L1PQ3SYA9 428 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 FAM153CQ494X1 144 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 ARSIQ5FYB1 569 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 SIRPB2Q5JXA9 342 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 HP1BP3Q5SSJ5 553 aaPredicted RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 FNBP1LQ5T0N5 605 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 C9orf64Q5T6V5 341 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 ARMC12Q5T9G4 340 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 LRRC8BQ6P9F7 803 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 ZNF534Q76KX8 674 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 TRMT11Q7Z4G4 463 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 CAND1Q86VP6 1230 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 KLHDC8BQ8IXV7 354 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 PLPP6Q8IY26 295 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 PDIK1LQ8N165 341 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 RPLP0P6Q8NHW5 317 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 RMDN1Q96DB5 314 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 SHDQ96IW2 340 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 FEM1CQ96JP0 617 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 SERPINB12Q96P63 405 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 TUBGCP5Q96RT8 1024 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 TDRD1Q9BXT4 1180 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 CPEB1Q9BZB8 566 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 XAB2Q9HCS7 855 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 SAYSD1Q9NPB0 183 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 CD320Q9NPF0 282 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 CASS4Q9NQ75 786 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 MRPS17Q9Y2R5 130 aaKnown RBP10.53□□□□□ -0.72
TPM1-221ENST00000559831 WASF2Q9Y6W5 498 aa10.53□□□□□ -0.72
TPM1-221ENST00000559831 PRUNE2Q8WUY3 3088 aa10.52□□□□□ -0.72
TPM1-221ENST00000559831 STK25O00506 426 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 PPFIA2O75334 1257 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 ERLIN1O75477 346 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 LEFTY1O75610 366 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 PGLSO95336 258 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 NDST3O95803 873 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 CPP00450 1065 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 CTSLP07711 333 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 PDHA1P08559 390 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 HOXB2P14652 356 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 TPH1P17752 444 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 HLA-DPA1P20036 260 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 MGAT1P26572 445 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 TARSP26639 723 aaKnown RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 PSMD8P48556 350 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 EPHB1P54762 984 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 MRPS21P82921 87 aaKnown RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 DHX9Q08211 1270 aaKnown RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 CDH17Q12864 832 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 PDIA2Q13087 525 aaKnown RBP10.52□□□□□ -0.73
TPM1-221ENST00000559831 CCINQ13939 588 aa10.52□□□□□ -0.73
TPM1-221ENST00000559831 SEPT6Q14141 434 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms