RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CNTNAP3Q9BZ76 1288 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 ATP13A3Q9H7F0 1226 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 ETNK2Q9NVF9 386 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 FTSJ1Q9UET6 329 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 LCMT1Q9UIC8 334 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 NENFQ9UMX5 172 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 APOBEC2Q9Y235 224 aaKnown RBP8.29□□□□□ -1.08
SNX1-207ENST00000559401 DCHS1Q96JQ0 3298 aa8.29□□□□□ -1.08
SNX1-207ENST00000559401 KNL1Q8NG31 2342 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 C10orf142B7Z368 130 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 FPGTO14772 594 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 YKT6O15498 198 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 PCDHGA12O60330 932 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 MMP20O60882 483 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 NEBLO76041 1014 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 TOP3BO95985 862 aaKnown RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 KRT7P08729 469 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 CD48P09326 243 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 TNNT1P13805 278 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 ITIH2P19823 946 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 EPHA8P29322 1005 aaPredicted RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 RGRP47804 291 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 SCNN1BP51168 640 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 RENBPP51606 427 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 BCL2L1Q07817 233 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 ELP6Q0PNE2 266 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 BNIP3Q12983 259 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 RFTN1Q14699 578 aaPredicted RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 LBRQ14739 615 aaKnown RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 ASTE1Q2TB18 679 aaPredicted RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 ATP13A4Q4VNC1 1196 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 HS1BP3Q53T59 392 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 AFMIDQ63HM1 303 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 ERAP2Q6P179 960 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 GCNT7Q6ZNI0 430 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 ZSCAN30Q86W11 494 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 CAMK1DQ8IU85 385 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 MAP7D3Q8IWC1 876 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 RHOT2Q8IXI1 618 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 CHCHD4Q8N4Q1 142 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 EID2Q8N6I1 236 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 PNPLA1Q8N8W4 532 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 TMEM145Q8NBT3 493 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 SLC35G2Q8TBE7 412 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 PDCD6IPQ8WUM4 868 aaKnown RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 TUBGCP5Q96RT8 1024 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 SCNM1Q9BWG6 230 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 C1QTNF7Q9BXJ2 289 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 CPEB1Q9BZB8 566 aaKnown RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 SUV39H2Q9H5I1 410 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 RCOR3Q9P2K3 495 aaPredicted RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 SEPT3Q9UH03 358 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 TDRD6O60522 2096 aaKnown RBP8.28□□□□□ -1.08
SNX1-207ENST00000559401 DNAH14Q0VDD8 3507 aa8.28□□□□□ -1.08
SNX1-207ENST00000559401 PCNX2A6NKB5 2137 aa8.27□□□□□ -1.08
SNX1-207ENST00000559401 LRRK1Q38SD2 2015 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 LRRD1A4D1F6 860 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 POM121BA6NF01 834 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 RAD51BO15315 384 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 SPINT1O43278 529 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 MFSD11O43934 449 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 CBFA2T3O75081 653 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 TM7SF2O76062 418 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 TRIM16O95361 564 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 MAP3K6O95382 1288 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 LDOC1O95751 146 aaPredicted RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 KRT1P04264 644 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 PRKCGP05129 697 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 ATXN1LP0C7T5 689 aaKnown RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 TIMP2P16035 220 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 MAN1A1P33908 653 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 NOP2P46087 812 aaKnown RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 SUOXP51687 545 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 THOP1P52888 689 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 TAS2R40P59535 323 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 AP1S1P61966 158 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 SEMG2Q02383 582 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 ITKQ08881 620 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 SLC10A7Q0GE19 358 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 TBX2Q13207 712 aaPredicted RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 DPYSL3Q14195 570 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 FGL2Q14314 439 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 PDK2Q15119 407 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 SHBQ15464 509 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 UGP2Q16851 508 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 ZNF542PQ5EBM4 170 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 MARC1Q5VT66 337 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 BRAT1Q6PJG6 821 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 KYAT3Q6YP21 454 aaKnown RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 Q6ZSR6 202 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.27□□□□□ -1.09
SNX1-207ENST00000559401 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 RFFLQ8WZ73 363 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 CNDP2Q96KP4 475 aaKnown RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 ZNF641Q96N77 438 aaPredicted RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 ZNF830Q96NB3 372 aaPredicted RBP8.27□□□□□ -1.09
SNX1-207ENST00000559401 ZNF599Q96NL3 588 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 PSKH2Q96QS6 385 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms