RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 KDM1BQ8NB78 822 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 FBXO36Q8NEA4 188 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 EPS8L3Q8TE67 593 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 PLA2G4CQ9UP65 541 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 MTF2Q9Y483 593 aaPredicted RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 NCOR1O75376 2440 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ATP9BO43861 1147 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 AVILO75366 819 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ZNF821O75541 412 aaPredicted RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 TMCC1O94876 653 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 CCNB1P14635 433 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ELK3P41970 407 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 IL12RB1P42701 662 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 SEC13P55735 322 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ENPP2Q13822 863 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ZNF234Q14588 700 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 LBRQ14739 615 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 FBXO43Q4G163 708 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 FAM76AQ8TAV0 307 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 FRS2Q8WU20 508 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ACOX2Q99424 681 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 CCDC77Q9BR77 488 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 FOXQ1Q9C009 403 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 TMEM245Q9H330 911 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 TBC1D17Q9HA65 648 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ZDHHC4Q9NPG8 344 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 ADAM21Q9UKJ8 722 aa16.75■□□□□ 0.27
TPM1-219ENST00000559397 FCF1Q9Y324 198 aaKnown RBP16.75■□□□□ 0.27
TPM1-219ENST00000559397 ATG2BQ96BY7 2078 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 NPC1O15118 1278 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 SUN1O94901 812 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 IVLP07476 585 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 TIE1P35590 1138 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 RENBPP51606 427 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 MRPS21P82921 87 aaKnown RBP16.74■□□□□ 0.27
TPM1-219ENST00000559397 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
TPM1-219ENST00000559397 LONRF1Q17RB8 773 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
TPM1-219ENST00000559397 DGKKQ5KSL6 1271 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 MARC1Q5VT66 337 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 KCTD11Q693B1 232 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 PDCD7Q8N8D1 485 aaKnown RBP16.74■□□□□ 0.27
TPM1-219ENST00000559397 ZNF513Q8N8E2 541 aaPredicted RBP16.74■□□□□ 0.27
TPM1-219ENST00000559397 USP33Q8TEY7 942 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 NSMCE1Q8WV22 266 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 SIGLEC10Q96LC7 697 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 AGAP3Q96P47 875 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 NELL2Q99435 816 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 CEP44Q9C0F1 390 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 CENPHQ9H3R5 247 aa16.74■□□□□ 0.27
TPM1-219ENST00000559397 TLDC2A0PJX2 215 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 FAM170BA6NMN3 283 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 ERI2A8K979 691 aaKnown RBP16.73■□□□□ 0.27
TPM1-219ENST00000559397 MUSKO15146 869 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 AP2A1O95782 977 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 GRIA1P42261 906 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 ST8SIA6P61647 398 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 GABPB1Q06547 395 aaPredicted RBP16.73■□□□□ 0.27
TPM1-219ENST00000559397 E2F5Q15329 346 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 DLG2Q15700 870 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 LRRC8BQ6P9F7 803 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 METTL3Q86U44 580 aaKnown RBP16.73■□□□□ 0.27
TPM1-219ENST00000559397 TDRPQ86YL5 185 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 PGBD5Q8N414 524 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 ISG20Q96AZ6 181 aaKnown RBP16.73■□□□□ 0.27
TPM1-219ENST00000559397 PSKH2Q96QS6 385 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 VPS37BQ9H9H4 285 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 LMAN1LQ9HAT1 526 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 RBM22Q9NW64 420 aaKnown RBP eCLIP16.73■□□□□ 0.27
TPM1-219ENST00000559397 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 LHX3Q9UBR4 397 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 FETUBQ9UGM5 382 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 SEPT3Q9UH03 358 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 RSPH14Q9UHP6 348 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 CHMP2BQ9UQN3 213 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 BDP1A6H8Y1 2624 aa16.73■□□□□ 0.27
TPM1-219ENST00000559397 TTC34A8MYJ7 566 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 WASH3PC4AMC7 463 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 RGS16O15492 202 aaPredicted RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 SPAG6O75602 509 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 AGTP01019 485 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 HLA-DQB2P05538 268 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 NFKB1P19838 968 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 SSTR1P30872 391 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 PHBP35232 272 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 NNMTP40261 264 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 MMP13P45452 471 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 LMAN1P49257 510 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 MTM1Q13496 603 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 UBXN2BQ14CS0 331 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 RASA2Q15283 850 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 FNDC3BQ53EP0 1204 aaKnown RBP16.72■□□□□ 0.27
TPM1-219ENST00000559397 C2orf27AQ580R0 203 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 C22orf39Q6P5X5 142 aa16.72■□□□□ 0.27
TPM1-219ENST00000559397 TRIM67Q6ZTA4 783 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms