RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 FAM71DQ8N9W8 422 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 SUMF1Q8NBK3 374 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 IMP4Q96G21 291 aaKnown RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 PBKQ96KB5 322 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 CAPZA3Q96KX2 299 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TRIB3Q96RU7 358 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 RBM15Q96T37 977 aaKnown RBP eCLIP11.01□□□□□ -0.65
TPM1-217ENST00000559108 DUSP15Q9H1R2 295 aaPredicted RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 GLOD4Q9HC38 313 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 SCUBE2Q9NQ36 999 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TTC7AQ9ULT0 858 aaPredicted RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 PCDHGA2Q9Y5H1 932 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TMEM131Q92545 1883 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 PCDH15Q96QU1 1955 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TRPM6Q9BX84 2022 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
TPM1-217ENST00000559108 HACD1B0YJ81 288 aa11□□□□□ -0.65
TPM1-217ENST00000559108 AREL1O15033 823 aa11□□□□□ -0.65
TPM1-217ENST00000559108 HTRA2O43464 458 aaPredicted RBP11□□□□□ -0.65
TPM1-217ENST00000559108 METTL18O95568 372 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ADH1BP00325 375 aa11□□□□□ -0.65
TPM1-217ENST00000559108 PRNPP04156 253 aa11□□□□□ -0.65
TPM1-217ENST00000559108 IGHV4-34P06331 123 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ZSCAN5DPP0CG00 497 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ADRB3P13945 408 aa11□□□□□ -0.65
TPM1-217ENST00000559108 CD6P30203 668 aa11□□□□□ -0.65
TPM1-217ENST00000559108 HSPA9P38646 679 aaKnown RBP11□□□□□ -0.65
TPM1-217ENST00000559108 CD86P42081 329 aa11□□□□□ -0.65
TPM1-217ENST00000559108 RECQLP46063 649 aaPredicted RBP11□□□□□ -0.65
TPM1-217ENST00000559108 RENBPP51606 427 aa11□□□□□ -0.65
TPM1-217ENST00000559108 AP1S1P61966 158 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ZBTB16Q05516 673 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ITKQ08881 620 aa11□□□□□ -0.65
TPM1-217ENST00000559108 E2F5Q15329 346 aa11□□□□□ -0.65
TPM1-217ENST00000559108 FAXCQ5TGI0 409 aa11□□□□□ -0.65
TPM1-217ENST00000559108 DARS2Q6PI48 645 aaKnown RBP11□□□□□ -0.65
TPM1-217ENST00000559108 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
TPM1-217ENST00000559108 USP30Q70CQ3 517 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ARMCX6Q7L4S7 300 aa11□□□□□ -0.65
TPM1-217ENST00000559108 CDKL3Q8IVW4 592 aaPredicted RBP11□□□□□ -0.65
TPM1-217ENST00000559108 TMEFF1Q8IYR6 380 aa11□□□□□ -0.65
TPM1-217ENST00000559108 ACTRT1Q8TDG2 376 aa11□□□□□ -0.65
TPM1-217ENST00000559108 UBE2Q2Q8WVN8 375 aa11□□□□□ -0.65
TPM1-217ENST00000559108 GPR174Q9BXC1 333 aa11□□□□□ -0.65
TPM1-217ENST00000559108 TDRD1Q9BXT4 1180 aaKnown RBP11□□□□□ -0.65
TPM1-217ENST00000559108 HDAC8Q9BY41 377 aa11□□□□□ -0.65
TPM1-217ENST00000559108 FAM126AQ9BYI3 521 aaPredicted RBP11□□□□□ -0.65
TPM1-217ENST00000559108 POLR1EQ9GZS1 481 aaKnown RBP11□□□□□ -0.65
TPM1-217ENST00000559108 SUV39H2Q9H5I1 410 aa11□□□□□ -0.65
TPM1-217ENST00000559108 UBP1Q9NZI7 540 aa11□□□□□ -0.65
TPM1-217ENST00000559108 PRR23AA6NEV1 266 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 C1QTNF3-AMACRE9PGA6 284 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PGRMC1O00264 195 aaKnown RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 WNT9AO14904 365 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PLRG1O43660 514 aaKnown RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 PGLSO95336 258 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 GM2AP17900 193 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PSMB4P28070 264 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 CETN2P41208 172 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 NBL1P41271 181 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 CHRNA4P43681 627 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PTPN5P54829 565 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 FGL2Q14314 439 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 CCNG2Q16589 344 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 CYP1B1Q16678 543 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 ANKRD20A2Q5SQ80 823 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 ANKRD20A1Q5TYW2 823 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 ANKRD20A3Q5VUR7 823 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 SEL1L3Q68CR1 1132 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PMS2CLQ68D20 193 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 ERN2Q76MJ5 926 aaKnown RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 DSG4Q86SJ6 1040 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 KLHDC8BQ8IXV7 354 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 C12orf50Q8NA57 414 aaPredicted RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 NSMCE1Q8WV22 266 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PIH1D2Q8WWB5 315 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 FUBP1Q96AE4 644 aaKnown RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 RTP4Q96DX8 246 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 LRIG1Q96JA1 1093 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 MRGPRX2Q96LB1 330 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 CCDC114Q96M63 670 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 SPATA13Q96N96 652 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 TUBGCP5Q96RT8 1024 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 OMDQ99983 421 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 SLC25A51Q9H1U9 297 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 GBA3Q9H227 469 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 EPC1Q9H2F5 836 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 CAAP1Q9H8G2 361 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 KLHL8Q9P2G9 620 aaPredicted RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 DKK3Q9UBP4 350 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 FZD4Q9ULV1 537 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 ZFR2Q9UPR6 939 aaKnown RBP10.99□□□□□ -0.65
TPM1-217ENST00000559108 CHKBQ9Y259 395 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 NEU2Q9Y3R4 380 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 PCDHB9Q9Y5E1 797 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 RAI2Q9Y5P3 530 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 FADS3Q9Y5Q0 445 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 OTOGLQ3ZCN5 2332 aa10.99□□□□□ -0.65
TPM1-217ENST00000559108 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms