RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 ITM2CQ9NQX7 267 aa6.31□□□□□ -1.4
ZEB1-211ENST00000558440 TLR8Q9NR97 1041 aaKnown RBP6.31□□□□□ -1.4
ZEB1-211ENST00000558440 PANK4Q9NVE7 773 aa6.31□□□□□ -1.4
ZEB1-211ENST00000558440 USP36Q9P275 1121 aaKnown RBP6.31□□□□□ -1.4
ZEB1-211ENST00000558440 EIF2B4Q9UI10 523 aaKnown RBP6.31□□□□□ -1.4
ZEB1-211ENST00000558440 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.31□□□□□ -1.4
ZEB1-211ENST00000558440 NME7Q9Y5B8 376 aa6.31□□□□□ -1.4
ZEB1-211ENST00000558440 STON1Q9Y6Q2 735 aa6.31□□□□□ -1.4
ZEB1-211ENST00000558440 A0A1B0GVT2 93 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 KCNJ18B7U540 433 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CAPN9O14815 690 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 TBX18O95935 607 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CISD3P0C7P0 127 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 ZNF20P17024 532 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 ATICP31939 592 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 HNF1BP35680 557 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 ATP5C1P36542 298 aaKnown RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 STAT6P42226 847 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 IL12RB1P42701 662 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 GRK6P43250 576 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CSNK1EP49674 416 aaKnown RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CCT8P50990 548 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 BNC1Q01954 994 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 NFATC3Q12968 1075 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 SMAD1Q15797 465 aaKnown RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 SNRNP35Q16560 246 aaKnown RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CCDC73Q6ZRK6 1079 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 SPATC1Q76KD6 591 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 BRAPQ7Z569 592 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CACUL1Q86Y37 369 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 TMPRSS6Q8IU80 811 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CCDC65Q8IXS2 484 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 KBTBD2Q8IY47 623 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 SYAP1Q96A49 352 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CCDC127Q96BQ5 260 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 NXPE2Q96DL1 559 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 CGRRF1Q99675 332 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 FGFBP2Q9BYJ0 223 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 PCED1AQ9H1Q7 454 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 IPPKQ9H8X2 491 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 BARX1Q9HBU1 254 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 PLK2Q9NYY3 685 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 IL37Q9NZH6 218 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 THAP10Q9P2Z0 257 aaPredicted RBP6.3□□□□□ -1.4
ZEB1-211ENST00000558440 BTBD3Q9Y2F9 522 aa6.3□□□□□ -1.4
ZEB1-211ENST00000558440 FAM92AA1XBS5 289 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 FRMD3A2A2Y4 597 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 C1QTNF3-AMACRE9PGA6 284 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 PLK4O00444 970 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 PDPK1O15530 556 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 RRP8O43159 456 aaKnown RBP6.29□□□□□ -1.4
ZEB1-211ENST00000558440 KLHL18O94889 574 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 IGLV3-19P01714 112 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 TRIM21P19474 475 aaKnown RBP6.29□□□□□ -1.4
ZEB1-211ENST00000558440 CYP2J2P51589 502 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 MAP3K7CLP57077 242 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 MYL6P60660 151 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 PPP2CBP62714 309 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 PPP2CAP67775 309 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 CYP24A1Q07973 514 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 BIRC3Q13489 604 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 PSMD6Q15008 389 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 SKIDA1Q1XH10 827 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 KIF19Q2TAC6 998 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 ZNF699Q32M78 642 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 ZNF667Q5HYK9 610 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 C10orf120Q5SQS8 335 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 PHF19Q5T6S3 580 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 CD276Q5ZPR3 534 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 DHRS13Q6UX07 377 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 SERPINA13PQ6UXR4 307 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 SCARA5Q6ZMJ2 495 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 ANKS1BQ7Z6G8 1248 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 TADA2BQ86TJ2 420 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 TMPRSS12Q86WS5 348 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 LSM14AQ8ND56 463 aaKnown RBP6.29□□□□□ -1.4
ZEB1-211ENST00000558440 NUDT10Q8NFP7 164 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 IGSF8Q969P0 613 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 NUDT11Q96G61 164 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 TRIM9Q9C026 710 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 CIPCQ9C0C6 399 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 SMYD3Q9H7B4 428 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 ADAM29Q9UKF5 820 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 SMC3Q9UQE7 1217 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 ANKRD6Q9Y2G4 727 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 ZNF510Q9Y2H8 683 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 SLC27A6Q9Y2P4 619 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 TRAF6Q9Y4K3 522 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 FLNCQ14315 2725 aa6.29□□□□□ -1.4
ZEB1-211ENST00000558440 MDM4O15151 490 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 PCDHGA12O60330 932 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 DFNA5O60443 496 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 C1QL1O75973 258 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 KNG1P01042 644 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 PENKP01210 267 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-211ENST00000558440 ENO2P09104 434 aaPredicted RBP6.28□□□□□ -1.4
ZEB1-211ENST00000558440 FAM200BP0CF97 657 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 CDK4P11802 303 aa6.28□□□□□ -1.4
ZEB1-211ENST00000558440 RARGP13631 454 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms