RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 CFAP58Q5T655 872 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 LRRC69Q6ZNQ3 347 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 FAM181AQ8N9Y4 354 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 LMX1AQ8TE12 382 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 BTN2A2Q8WVV5 523 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 BAP1Q92560 729 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 VCPIP1Q96JH7 1222 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 EXOC2Q96KP1 924 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 DEPDC7Q96QD5 511 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 WRAP53Q9BUR4 548 aaKnown RBP14.81□□□□□ -0.04
SHMT2-235ENST00000557740 ABCG4Q9H172 646 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 PARVAQ9NVD7 372 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 GPATCH2LQ9NWQ4 482 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 TAS2R14Q9NYV8 317 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 NCKIPSDQ9NZQ3 722 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 LHX3Q9UBR4 397 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 APOBEC3BQ9UH17 382 aaKnown RBP14.81□□□□□ -0.04
SHMT2-235ENST00000557740 AP4E1Q9UPM8 1137 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 MFHAS1Q9Y4C4 1052 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 CSNK1G3Q9Y6M4 447 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 ADAMTS20P59510 1910 aa14.81□□□□□ -0.04
SHMT2-235ENST00000557740 ARHGAP42A6NI28 874 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 LRRC53A6NM62 1247 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 EIF3CLB5ME19 914 aaKnown RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 EEF2KO00418 725 aaKnown RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 ATMINO43313 823 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 BRINP1O60477 761 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 PIGNO95427 931 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 MYF5P13349 255 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 SUOXP51687 545 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 OGDHQ02218 1023 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 MAMLD1Q13495 774 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 COL9A2Q14055 689 aaPredicted RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 GRM3Q14832 879 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 ASIC2Q16515 512 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 DEFB133Q30KQ1 61 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 ANO6Q4KMQ2 910 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 DNAAF5Q86Y56 855 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 PHACTR4Q8IZ21 702 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 IFI44Q8TCB0 444 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 MAPK15Q8TD08 544 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 VOPP1Q96AW1 172 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 CENPTQ96BT3 561 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 EIF3CQ99613 913 aaKnown RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 IL12RB2Q99665 862 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 CPEB1Q9BZB8 566 aaKnown RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 DHX35Q9H5Z1 703 aaKnown RBP14.8□□□□□ -0.04
SHMT2-235ENST00000557740 SPASTQ9UBP0 616 aa14.8□□□□□ -0.04
SHMT2-235ENST00000557740 LY6G6EA0A0G2JKS1 128 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 SMTNL1A8MU46 457 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 TOR1BO14657 336 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 INSIG1O15503 277 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 TEX33O43247 280 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 DAPK3O43293 454 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 TLX3O43711 291 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 PRAMEF11O60813 436 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 TIMP2P16035 220 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 ACTN2P35609 894 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 EIF2S3P41091 472 aaKnown RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 NDST2P52849 883 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 YPEL5P62699 121 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 EIF2B5Q13144 721 aaKnown RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 CDKN3Q16667 212 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 KLHL40Q2TBA0 621 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 FILIP1LQ4L180 1135 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 PLEKHA7Q6IQ23 1121 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 ERAP2Q6P179 960 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 MACC1Q6ZN28 852 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 IRF2BP2Q7Z5L9 587 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 RBFAQ8N0V3 343 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 PAF1Q8N7H5 531 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 SNIP1Q8TAD8 396 aaKnown RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 CHD5Q8TDI0 1954 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 FGF11Q92914 225 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 CELF6Q96J87 481 aaKnown RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 SYT11Q9BT88 431 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 SLC13A1Q9BZW2 595 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 LRRC19Q9H756 370 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 RTN4Q9NQC3 1192 aaKnown RBP14.79□□□□□ -0.04
SHMT2-235ENST00000557740 KLF15Q9UIH9 416 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 PCDHB1Q9Y5F3 818 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 U3KQA8 63 aa14.79□□□□□ -0.04
SHMT2-235ENST00000557740 CPED1A4D0V7 1026 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 PRPSAP2O60256 369 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 CSO75390 466 aaKnown RBP14.78□□□□□ -0.04
SHMT2-235ENST00000557740 RNF8O76064 485 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 ANXA6P08133 673 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 IRF4Q15306 451 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 CYTH1Q15438 398 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 NR0B2Q15466 257 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 TBC1D25Q3MII6 688 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 TMEM52BQ4KMG9 183 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 PRRT3Q5FWE3 981 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 FAXCQ5TGI0 409 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 CDCP2Q5VXM1 449 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 BRAT1Q6PJG6 821 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 RFX8Q6ZV50 586 aa14.78□□□□□ -0.04
SHMT2-235ENST00000557740 TP53I13Q8NBR0 393 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-235ENST00000557740 HCAR2Q8TDS4 363 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms