RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 BMPR2Q13873 1038 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 KCNC3Q14003 757 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 DMC1Q14565 340 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 LRRC14Q15048 493 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 TSTD2Q5T7W7 516 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 MROH9Q5TGP6 573 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 TMC5Q6UXY8 1006 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 SH2D5Q6ZV89 423 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-233ENST00000557529 STRA8Q7Z7C7 330 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 TAX1BP1Q86VP1 789 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 TMEM25Q86YD3 366 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 CNTN4Q8IWV2 1026 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 APCDD1Q8J025 514 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 C12orf76Q8N812 135 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-233ENST00000557529 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 CKAP2Q8WWK9 683 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
SHMT2-233ENST00000557529 CHMP6Q96FZ7 201 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 LMLNQ96KR4 655 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 ZSWIM3Q96MP5 696 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 ZNF778Q96MU6 729 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 RBBP8Q99708 897 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 BBS2Q9BXC9 721 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 TDRD1Q9BXT4 1180 aaKnown RBP12.59□□□□□ -0.39
SHMT2-233ENST00000557529 ADGRE3Q9BY15 652 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 SPHK2Q9NRA0 654 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 IARS2Q9NSE4 1012 aaKnown RBP12.59□□□□□ -0.39
SHMT2-233ENST00000557529 ABCB8Q9NUT2 735 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 MARK1Q9P0L2 795 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 RIMKLBQ9ULI2 386 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 MYO7AQ13402 2215 aa12.59□□□□□ -0.39
SHMT2-233ENST00000557529 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 TIMM44O43615 452 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 SIN3BO75182 1162 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 GJB3O75712 270 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 FAM107AO95990 144 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 ITGA2BP08514 1039 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 CD70P32970 193 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 RPA3P35244 121 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-233ENST00000557529 ARCN1P48444 511 aaKnown RBP12.58□□□□□ -0.4
SHMT2-233ENST00000557529 CSNK1DP48730 415 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 LIMK2P53671 638 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 PDE1BQ01064 536 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 SULT2A1Q06520 285 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 ILF2Q12905 390 aaKnown RBP12.58□□□□□ -0.4
SHMT2-233ENST00000557529 CNGA3Q16281 694 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 PITRM1Q5JRX3 1037 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 HHATQ5VTY9 493 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 ESRP1Q6NXG1 681 aaKnown RBP12.58□□□□□ -0.4
SHMT2-233ENST00000557529 NCEH1Q6PIU2 408 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 SRLQ86TD4 932 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 LMNTD2Q8IXW0 634 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 ITFG1Q8TB96 612 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 CALML6Q8TD86 181 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 BRSK1Q8TDC3 778 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 BCAS4Q8TDM0 211 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 EXOC2Q96KP1 924 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 KLF6Q99612 283 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-233ENST00000557529 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 IQCGQ9H095 443 aaKnown RBP12.58□□□□□ -0.4
SHMT2-233ENST00000557529 SLC17A6Q9P2U8 582 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 RAI2Q9Y5P3 530 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 PSAT1Q9Y617 370 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 NOTCH4Q99466 2003 aa12.58□□□□□ -0.4
SHMT2-233ENST00000557529 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CCDC78A2IDD5 438 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 HMX2A2RU54 273 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 GOLGA8RI6L899 631 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 NDUFAB1O14561 156 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 SLC7A4O43246 635 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 VAPBO95292 243 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 ASMTLO95671 621 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CRTAMO95727 393 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 PABPC1P11940 636 aaKnown RBP12.57□□□□□ -0.4
SHMT2-233ENST00000557529 TYRP14679 529 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 FSHRP23945 695 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CCT5P48643 541 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 POLD2P49005 469 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 SERPINB8P50452 374 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 NEK3P51956 506 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 SEC24CP53992 1094 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 WDR4P57081 412 aaKnown RBP12.57□□□□□ -0.4
SHMT2-233ENST00000557529 GALNT3Q14435 633 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CBX2Q14781 532 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-233ENST00000557529 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 TMEM184AQ6ZMB5 413 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 VN1R2Q8NFZ6 395 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 BLOC1S5Q8TDH9 187 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 TCP10LQ8TDR4 215 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CABS1Q96KC9 395 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 MAGEB18Q96M61 343 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 CCT8L2Q96SF2 557 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 AGAP2Q99490 1192 aa12.57□□□□□ -0.4
SHMT2-233ENST00000557529 NSRP1Q9H0G5 558 aaKnown RBP12.57□□□□□ -0.4
SHMT2-233ENST00000557529 LINC00597Q9H2U6 94 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms