RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CBWD3Q5JTY5 395 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 CBWD5Q5RIA9 395 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 RERGQ96A58 199 aaPredicted RBP8.9□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF350Q9GZX5 532 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 L2HGDHQ9H9P8 463 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 DDIT4Q9NX09 232 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 CDC42BPAQ5VT25 1732 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 IQSEC1Q6DN90 963 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 GPAT2Q6NUI2 795 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 SWSAP1Q6NVH7 229 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 SYT12Q8IV01 421 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 NDUFB9Q9Y6M9 179 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 DHRS12A0PJE2 317 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 SLC28A2O43868 658 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 TFRCP02786 760 aaKnown RBP8.9□□□□□ -0.99
SYNE3-205ENST00000557275 ITGA4P13612 1032 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 TTPAP49638 278 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 HERC3Q15034 1050 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 SNX20Q7Z614 316 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 ANKEF1Q9NU02 776 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 TEX13CA0A0J9YWL9 993 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 OR1I1O60431 355 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 TRMUO75648 421 aaKnown RBP8.9□□□□□ -0.99
SYNE3-205ENST00000557275 SLC1A2P43004 574 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 CEBPGP53567 150 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 ALG10BQ5I7T1 473 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 USP45Q70EL2 814 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 BEND5Q7L4P6 421 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 LENG9Q96B70 501 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 PNMA5Q96PV4 448 aa8.9□□□□□ -0.99
SYNE3-205ENST00000557275 MAP3K6O95382 1288 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 RPA1P27694 616 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 FAPQ12884 760 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 HYIQ5T013 277 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ADAMTSL2Q86TH1 951 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SDR16C5Q8N3Y7 309 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 OR2L3Q8NG85 312 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TCF12Q99081 682 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 MAP3K14Q99558 947 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 EML1O00423 815 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 IFNA2P01563 188 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SNRPB2P08579 225 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 NPAS2Q99743 824 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 C19orf12Q9NSK7 152 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TBX22Q9Y458 520 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SEC16AO15027 2179 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 IQCMA0A1B0GVH7 501 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 M0R036 132 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 OGTO15294 1046 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TULP3O75386 442 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 UNC5CO95185 931 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SERPINA6P08185 405 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 FSCN1Q16658 493 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 IL27RAQ6UWB1 636 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 BPIFB6Q8NFQ5 453 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ETNPPLQ8TBG4 499 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 PGM2Q96G03 612 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 HOPXQ9BPY8 73 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SAMHD1Q9Y3Z3 626 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 PARNO95453 639 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 BPNT1O95861 308 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TSHRP16473 764 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CRATP43155 626 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ACOX1Q15067 660 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 MED22Q15528 200 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ZC3HC1Q86WB0 502 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CDYL2Q8N8U2 506 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 DIRAS2Q96HU8 199 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CDC42EP4Q9H3Q1 356 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 IFNA21P01568 189 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ITGAVP06756 1048 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CLUP10909 449 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ZNF37AP17032 561 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 GLS2Q9UI32 602 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 PCDHGA12O60330 932 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 RORAP35398 523 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CUL2Q13617 745 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ERFEQ4G0M1 354 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 C6orf52Q5T4I8 152 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 QTRT2Q9H974 415 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 NCF1BA6NI72 391 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 NCF1CA8MVU1 366 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 AIREO43918 545 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 NCF1P14598 390 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CDC25AP30304 524 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 MLLT6P55198 1093 aaPredicted RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 MPP5Q8N3R9 675 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TMEM68Q96MH6 324 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 CDRT15Q96T59 188 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 GSTT2P0CG29 244 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 SLC6A4P31645 630 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 ASMTP46597 345 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 OR10H5Q8NGA6 315 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 BTBD9Q96Q07 612 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 MRPL57Q9BQC6 102 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 RNF146Q9NTX7 359 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 MTRRQ9UBK8 725 aa8.89□□□□□ -0.99
SYNE3-205ENST00000557275 TDRKHQ9Y2W6 561 aaKnown RBP8.89□□□□□ -0.99
SYNE3-205ENST00000557275 PCDHA3Q9Y5H8 950 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms