RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 POLEQ07864 2286 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 PKDREJQ9NTG1 2253 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 CROCCQ5TZA2 2017 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 CSMD2Q7Z408 3487 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 MMP20O60882 483 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 CASP1P29466 404 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 DNA2P51530 1060 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 SRP54P61011 504 aaKnown RBP12.68□□□□□ -0.38
PSEN1-220ENST00000557037 PPP3CAQ08209 521 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 NNTQ13423 1086 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 LRRC73Q5JTD7 316 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 SYPL2Q5VXT5 272 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 NKAIN2Q5VXU1 208 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 GOLGA5Q8TBA6 731 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 RTP4Q96DX8 246 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 RPRD1AQ96P16 312 aaPredicted RBP12.68□□□□□ -0.38
PSEN1-220ENST00000557037 PSMB7Q99436 277 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 SPRY4Q9C004 299 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 TNMDQ9H2S6 317 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
PSEN1-220ENST00000557037 ENTPD4Q9Y227 616 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 POLHQ9Y253 713 aa12.68□□□□□ -0.38
PSEN1-220ENST00000557037 CDC14CA4D256 554 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 B4E171 279 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 NUDT21O43809 227 aaKnown RBP12.67□□□□□ -0.38
PSEN1-220ENST00000557037 SETSIPP0DME0 302 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 GGCXP38435 758 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 TSPAN7P41732 249 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 VAMP7P51809 220 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 LIMK2P53671 638 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 PMS2P54278 862 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 MAZP56270 477 aaKnown RBP12.67□□□□□ -0.38
PSEN1-220ENST00000557037 KRT83P78385 493 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
PSEN1-220ENST00000557037 ABHD18Q0P651 414 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 IRF4Q15306 451 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 NR6A1Q15406 480 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 TTC39BQ5VTQ0 682 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-220ENST00000557037 SPECC1LQ69YQ0 1117 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 SP5Q6BEB4 398 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-220ENST00000557037 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 TTC39CQ8N584 583 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 ATP6V0D2Q8N8Y2 350 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 TP53I13Q8NBR0 393 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-220ENST00000557037 SEMA4DQ92854 862 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 FAM149B1Q96BN6 582 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 LRRC27Q9C0I9 530 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 DPEP2Q9H4A9 486 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 KBTBD4Q9NVX7 518 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
PSEN1-220ENST00000557037 LRP4O75096 1905 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 C16orf96A6NNT2 1141 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 RHPN2P1A8MT19 583 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 KCNU1A8MYU2 1149 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 O00370 1275 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 KRT86O43790 486 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 NR3C1P04150 777 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 CD1CP29017 333 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 GKP32189 559 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 PGDP52209 483 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 RAB15P59190 212 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 PITX1P78337 314 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-220ENST00000557037 CRTC2Q53ET0 693 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-220ENST00000557037 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 PDXPQ96GD0 296 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 RBM15Q96T37 977 aaKnown RBP eCLIP12.66□□□□□ -0.38
PSEN1-220ENST00000557037 HEPHQ9BQS7 1158 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 C2orf49Q9BVC5 232 aaPredicted RBP12.66□□□□□ -0.38
PSEN1-220ENST00000557037 MFRPQ9BY79 579 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 TRIM55Q9BYV6 548 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 BLZF1Q9H2G9 400 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 ZDHHC6Q9H6R6 413 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 TMEM9Q9P0T7 183 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 VANGL2Q9ULK5 521 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 PCDHB3Q9Y5E6 796 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 CHD5Q8TDI0 1954 aa12.66□□□□□ -0.38
PSEN1-220ENST00000557037 SYNJ2BP-COX16A0A087WUM0 186 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 KATNA1O75449 491 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 ZNF821O75541 412 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-220ENST00000557037 STK17BO94768 372 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 TNFP01375 233 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 ITIH2P19823 946 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 HTR1BP28222 390 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.38
PSEN1-220ENST00000557037 CCNHP51946 323 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-220ENST00000557037 DPYDQ12882 1025 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 TRA2AQ13595 282 aaKnown RBP eCLIP12.65□□□□□ -0.38
PSEN1-220ENST00000557037 AUHQ13825 339 aaKnown RBP12.65□□□□□ -0.38
PSEN1-220ENST00000557037 NFATC4Q14934 902 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 KLHL40Q2TBA0 621 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 BRAPQ7Z569 592 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 SLC9A9Q8IVB4 645 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 OR6K2Q8NGY2 324 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 SLC35F5Q8WV83 523 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 C1QTNF7Q9BXJ2 289 aa12.65□□□□□ -0.38
PSEN1-220ENST00000557037 MRPL40Q9NQ50 206 aaKnown RBP12.65□□□□□ -0.38
PSEN1-220ENST00000557037 COX16Q9P0S2 106 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms