RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 LHX3Q9UBR4 397 aa14.27□□□□□ -0.13
SLIRP-207ENST00000556831 ANKRD6Q9Y2G4 727 aa14.27□□□□□ -0.13
SLIRP-207ENST00000556831 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.27□□□□□ -0.13
SLIRP-207ENST00000556831 MFHAS1Q9Y4C4 1052 aa14.27□□□□□ -0.13
SLIRP-207ENST00000556831 CNOT1A5YKK6 2376 aaKnown RBP14.27□□□□□ -0.13
SLIRP-207ENST00000556831 ASCC3Q8N3C0 2202 aaKnown RBP14.27□□□□□ -0.13
SLIRP-207ENST00000556831 FRYQ5TBA9 3013 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 A0A0A6YYK5 440 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-207ENST00000556831 PRAMEF26H0Y7S4 382 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 GIPC1O14908 333 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 LATO43561 262 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 TSPAN6O43657 245 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 AP1G1O43747 822 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 CD48P09326 243 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 ZFXP17010 805 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-207ENST00000556831 NFKBIAP25963 317 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 SUOXP51687 545 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 GSDMDP57764 484 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 AP1S1P61966 158 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 BCL2L1Q07817 233 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 ELP6Q0PNE2 266 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 SGCGQ13326 291 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 SLC14A1Q13336 389 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 TCEAL1Q15170 157 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 CYTH1Q15438 398 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 INAVAQ3KP66 663 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 ATP13A4Q4VNC1 1196 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 PPM1JQ5JR12 505 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 MARC1Q5VT66 337 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 LRRC38Q5VT99 294 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 ARHGAP36Q6ZRI8 547 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 DAAM2Q86T65 1068 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 TTC7BQ86TV6 843 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 TSEN2Q8NCE0 465 aaKnown RBP14.26□□□□□ -0.13
SLIRP-207ENST00000556831 FAM71BQ8TC56 605 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 TRIM44Q96DX7 344 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-207ENST00000556831 C1QTNF7Q9BXJ2 289 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 CPEB1Q9BZB8 566 aaKnown RBP14.26□□□□□ -0.13
SLIRP-207ENST00000556831 GAREM1Q9H706 876 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 GDF3Q9NR23 364 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 ETNK2Q9NVF9 386 aa14.26□□□□□ -0.13
SLIRP-207ENST00000556831 TMEM131Q92545 1883 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 CACNA1EQ15878 2313 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 C10orf142B7Z368 130 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 APOL1O14791 398 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 WNT9AO14904 365 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 VILLO15195 856 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 SLC31A1O15431 190 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 PSTPIP1O43586 416 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 NRDCO43847 1150 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 MFSD11O43934 449 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 DFNA5O60443 496 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 PIGNO95427 931 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 COMTP21964 271 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 HNRNPA2B1P22626 353 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 KDELR1P24390 212 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 MMP13P45452 471 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 CSNK1DP48730 415 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 CCT8P50990 548 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 SCNN1BP51168 640 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 NOVA1P51513 510 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 HADHBP55084 474 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 TAS2R38P59533 333 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 CCDC173Q0VFZ6 552 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 SUZ12Q15022 739 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 PAFAH1B3Q15102 231 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 IFI16Q16666 785 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 HLA-BQ31612 363 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 NCBP2-AS2Q69YL0 99 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 BRAT1Q6PJG6 821 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 SRLQ86TD4 932 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 VSIG1Q86XK7 387 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 RFX6Q8HWS3 928 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 OXR1Q8N573 874 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 CCNYQ8ND76 341 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 PCDH19Q8TAB3 1148 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 ZNF641Q96N77 438 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 PSKH2Q96QS6 385 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 MYOCQ99972 504 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 CAAP1Q9H8G2 361 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 SCUBE2Q9NQ36 999 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 DNAAF2Q9NVR5 837 aaKnown RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 DKK3Q9UBP4 350 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 TTLL3Q9Y4R7 772 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 FADS3Q9Y5Q0 445 aa14.25□□□□□ -0.13
SLIRP-207ENST00000556831 TP53BP1Q12888 1972 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-207ENST00000556831 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-207ENST00000556831 ZNF487B1APH4 448 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 YKT6O15498 198 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 BUB1BO60566 1050 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-207ENST00000556831 PRLRP16471 622 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 FECHP22830 423 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 ARRB1P49407 418 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-207ENST00000556831 ARSEP51690 589 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 POLR2LP62875 67 aaKnown RBP14.24□□□□□ -0.13
SLIRP-207ENST00000556831 ITKQ08881 620 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 NSUN2Q08J23 767 aaKnown RBP eCLIP14.24□□□□□ -0.13
SLIRP-207ENST00000556831 SLC10A7Q0GE19 358 aa14.24□□□□□ -0.13
SLIRP-207ENST00000556831 OVGP1Q12889 678 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms