RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 VPS41P49754 854 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 RAD51Q06609 339 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 TRAF2Q12933 501 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 PARP6Q2NL67 630 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 RALGPS1Q5JS13 557 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 ZNF776Q68DI1 518 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-211ENST00000556536 GDPD4Q6W3E5 623 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 CTAGE6Q86UF2 777 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 JAMLQ86YT9 394 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 TMPRSS6Q8IU80 811 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 CTAGE4Q8IX94 777 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 CEP112Q8N8E3 955 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 NOA1Q8NC60 698 aaKnown RBP17.59■□□□□ 0.41
TUBB3-211ENST00000556536 LRRN4CLQ8ND94 238 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 TMIEQ8NEW7 156 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 TSTD1Q8NFU3 115 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 PIP4K2CQ8TBX8 421 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 MRGPRX1Q96LB2 322 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 RUNDC3BQ96NL0 473 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 TUBGCP5Q96RT8 1024 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 MLPHQ9BV36 600 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-211ENST00000556536 ATP13A3Q9H7F0 1226 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 FBRSQ9HAH7 460 aa17.59■□□□□ 0.41
TUBB3-211ENST00000556536 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-211ENST00000556536 TRAFD1O14545 582 aaPredicted RBP17.58■□□□□ 0.4
TUBB3-211ENST00000556536 RAD51CO43502 376 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 RNASEH1O60930 286 aaKnown RBP17.58■□□□□ 0.4
TUBB3-211ENST00000556536 PMPCBO75439 489 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 GAS8O95995 478 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 PRNPP04156 253 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 SERPINF2P08697 491 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 ACTN2P35609 894 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 ID4P47928 161 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 BCL2L1Q07817 233 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 PTK6Q13882 451 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 DHX34Q14147 1143 aaKnown RBP17.58■□□□□ 0.4
TUBB3-211ENST00000556536 PPP1R7Q15435 360 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 CST6Q15828 149 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 KDELC1Q6UW63 502 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 MAMSTRQ6ZN01 415 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 DSG4Q86SJ6 1040 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 ZSWIM9Q86XI8 627 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 HMGB4Q8WW32 186 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 ARRDC3Q96B67 414 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 LRIG1Q96JA1 1093 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 KLHL32Q96NJ5 620 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 TRIM51Q9BSJ1 452 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 ETNK1Q9HBU6 452 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 RAB6BQ9NRW1 208 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 FAM153AQ9UHL3 310 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 RAI2Q9Y5P3 530 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 SHROOM3Q8TF72 1996 aa17.58■□□□□ 0.4
TUBB3-211ENST00000556536 K7ESF4 209 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 PLK4O00444 970 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 KPNA3O00505 521 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-211ENST00000556536 MID1O15344 667 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 C7P10643 843 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 SERPINA4P29622 427 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 SLC8A1P32418 973 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 PXNP49023 591 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-211ENST00000556536 CCR3P51677 355 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 GPS1Q13098 491 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 PCSK7Q16549 785 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 SYCP2LQ5T4T6 812 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 ANO7Q6IWH7 933 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 KIAA1324Q6UXG2 1013 aaKnown RBP17.57■□□□□ 0.4
TUBB3-211ENST00000556536 KLHDC8BQ8IXV7 354 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 MMGT1Q8N4V1 131 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 DTWD2Q8NBA8 298 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 MDGA1Q8NFP4 955 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 SIPA1Q96FS4 1042 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 ZNF641Q96N77 438 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-211ENST00000556536 TDRD1Q9BXT4 1180 aaKnown RBP17.57■□□□□ 0.4
TUBB3-211ENST00000556536 OSBPL1AQ9BXW6 950 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 SUV39H2Q9H5I1 410 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 RRAGDQ9NQL2 400 aaPredicted RBP17.57■□□□□ 0.4
TUBB3-211ENST00000556536 ATG2BQ96BY7 2078 aa17.57■□□□□ 0.4
TUBB3-211ENST00000556536 C1QTNF3-AMACRE9PGA6 284 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 HTRA2O43464 458 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-211ENST00000556536 SOCS5O75159 536 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 ANXA9O76027 345 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 PAPSS2O95340 614 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-211ENST00000556536 APBB3O95704 486 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 PDHA1P08559 390 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 FDFT1P37268 417 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 TERF1P54274 439 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 GEMP55040 296 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 WNT3AP56704 352 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 OLIG2Q13516 323 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 SEMA5AQ13591 1074 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 PRPSAP1Q14558 356 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 GRM3Q14832 879 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 SLC14A2Q15849 920 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 ZNF805Q5CZA5 627 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 FAM46CQ5VWP2 391 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 TSSK4Q6SA08 328 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 C4orf22Q6V702 233 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 SYDE1Q6ZW31 735 aaPredicted RBP17.56■□□□□ 0.4
TUBB3-211ENST00000556536 KDELC2Q7Z4H8 507 aa17.56■□□□□ 0.4
TUBB3-211ENST00000556536 MAML2Q8IZL2 1156 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms