RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TLX3O43711 291 aaPredicted RBP22.87■■□□□ 1.25
ACTN1-220ENST00000556433 OPA1O60313 960 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 TM7SF2O76062 418 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 TPI1P60174 286 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 EIF2B5Q13144 721 aaKnown RBP22.87■■□□□ 1.25
ACTN1-220ENST00000556433 MAMLD1Q13495 774 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 PPP1R2P3Q6NXS1 205 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 LMX1AQ8TE12 382 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 EXOC2Q96KP1 924 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 SYT11Q9BT88 431 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 CPEB1Q9BZB8 566 aaKnown RBP22.87■■□□□ 1.25
ACTN1-220ENST00000556433 USP29Q9HBJ7 922 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 RTN4Q9NQC3 1192 aaKnown RBP22.87■■□□□ 1.25
ACTN1-220ENST00000556433 PARVAQ9NVD7 372 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 LHX3Q9UBR4 397 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 UBA2Q9UBT2 640 aaPredicted RBP22.87■■□□□ 1.25
ACTN1-220ENST00000556433 MYO6Q9UM54 1294 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 ATRXP46100 2492 aa22.87■■□□□ 1.25
ACTN1-220ENST00000556433 LY6G6EA0A0G2JKS1 128 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 AQP9O43315 295 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 XPAP23025 273 aaPredicted RBP22.86■■□□□ 1.25
ACTN1-220ENST00000556433 PSMA2P25787 234 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 HTR7P34969 479 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 EIF2S3P41091 472 aaKnown RBP22.86■■□□□ 1.25
ACTN1-220ENST00000556433 THOP1P52888 689 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 COL9A2Q14055 689 aaPredicted RBP22.86■■□□□ 1.25
ACTN1-220ENST00000556433 PTK2BQ14289 1009 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 ANO6Q4KMQ2 910 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 NCAPGQ9BPX3 1015 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 WRAP53Q9BUR4 548 aaKnown RBP22.86■■□□□ 1.25
ACTN1-220ENST00000556433 C1QTNF7Q9BXJ2 289 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 ABCG4Q9H172 646 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 LRRC19Q9H756 370 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 DONSONQ9NYP3 566 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 U3KQA8 63 aa22.86■■□□□ 1.25
ACTN1-220ENST00000556433 CELSR3Q9NYQ7 3312 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 BRINP1O60477 761 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 GP1BAP07359 652 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 IGFALSP35858 605 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 ABCG1P45844 678 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 NDST2P52849 883 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 SOWAHCQ53LP3 525 aaPredicted RBP22.85■■□□□ 1.25
ACTN1-220ENST00000556433 CDCP2Q5VXM1 449 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 ZCCHC8Q6NZY4 707 aaKnown RBP22.85■■□□□ 1.25
ACTN1-220ENST00000556433 LRRC69Q6ZNQ3 347 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 BTN2A2Q8WVV5 523 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 CRELD1Q96HD1 420 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 CELF6Q96J87 481 aaKnown RBP22.85■■□□□ 1.25
ACTN1-220ENST00000556433 DHX35Q9H5Z1 703 aaKnown RBP22.85■■□□□ 1.25
ACTN1-220ENST00000556433 MBNL1Q9NR56 388 aaKnown RBP22.85■■□□□ 1.25
ACTN1-220ENST00000556433 SPASTQ9UBP0 616 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 PCSK1NQ9UHG2 260 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 AP4E1Q9UPM8 1137 aa22.85■■□□□ 1.25
ACTN1-220ENST00000556433 LRRC53A6NM62 1247 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 SMTNL1A8MU46 457 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 J3KR12 359 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 EEF2KO00418 725 aaKnown RBP22.84■■□□□ 1.25
ACTN1-220ENST00000556433 RRP8O43159 456 aaKnown RBP22.84■■□□□ 1.25
ACTN1-220ENST00000556433 PIGNO95427 931 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 ITPKBP27987 946 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 SUOXP51687 545 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 YPEL5P62699 121 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 ASIC2Q16515 512 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 KLHL40Q2TBA0 621 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 DEFB133Q30KQ1 61 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 TMEM52BQ4KMG9 183 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 FILIP1LQ4L180 1135 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 PLEKHA7Q6IQ23 1121 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 DNAAF5Q86Y56 855 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 IFI44Q8TCB0 444 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 HCAR2Q8TDS4 363 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 FGF11Q92914 225 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 IL12RB2Q99665 862 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 SLC39A8Q9C0K1 460 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 TCEAL2Q9H3H9 227 aaPredicted RBP22.84■■□□□ 1.25
ACTN1-220ENST00000556433 SUV39H2Q9H5I1 410 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 TMEM63CQ9P1W3 806 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 SALL4Q9UJQ4 1053 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 PCDHB1Q9Y5F3 818 aa22.84■■□□□ 1.25
ACTN1-220ENST00000556433 CPED1A4D0V7 1026 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 TPP1O14773 563 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 DAPK3O43293 454 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 ATMINO43313 823 aaPredicted RBP22.83■■□□□ 1.25
ACTN1-220ENST00000556433 PRAMEF11O60813 436 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 ACTN2P35609 894 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 EIF4A3P38919 411 aaKnown RBP22.83■■□□□ 1.25
ACTN1-220ENST00000556433 PAPOLAP51003 745 aaKnown RBP22.83■■□□□ 1.25
ACTN1-220ENST00000556433 ELP6Q0PNE2 266 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 C1orf61Q13536 156 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 GRM3Q14832 879 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 CDKN3Q16667 212 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 CA9Q16790 459 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 ERMARDQ5T6L9 678 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 RBFAQ8N0V3 343 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 ARFGAP1Q8N6T3 406 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 TP53I13Q8NBR0 393 aaPredicted RBP22.83■■□□□ 1.25
ACTN1-220ENST00000556433 MAPK15Q8TD08 544 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 DEPDC7Q96QD5 511 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 BPIFA3Q9BQP9 254 aa22.83■■□□□ 1.25
ACTN1-220ENST00000556433 HAUS4Q9H6D7 363 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms