RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NCEH1Q6PIU2 408 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 BRAT1Q6PJG6 821 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CCDC137Q6PK04 289 aaKnown RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 SLC36A4Q6YBV0 504 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 B4GALNT4Q76KP1 1039 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 LONP2Q86WA8 852 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ZNF567Q8N184 647 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 PGBD5Q8N414 524 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 HDDC3Q8N4P3 179 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CNTD1Q8N815 330 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 C12orf50Q8NA57 414 aaPredicted RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 MDGA1Q8NFP4 955 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 OR6K2Q8NGY2 324 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CCHCR1Q8TD31 782 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 LRRN4Q8WUT4 740 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 RAB7BQ96AH8 199 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 RTP4Q96DX8 246 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ERLEC1Q96DZ1 483 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 KLHL32Q96NJ5 620 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 FCRL5Q96RD9 977 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ADGRE3Q9BY15 652 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CEP41Q9BYV8 373 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 NOD2Q9HC29 1040 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ITM2CQ9NQX7 267 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 PAK5Q9P286 719 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 DKK3Q9UBP4 350 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 METRNQ9UJH8 293 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 FZD4Q9ULV1 537 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 RPL26L1Q9UNX3 145 aaKnown RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 AAR2Q9Y312 384 aaKnown RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 ARIH1Q9Y4X5 557 aaPredicted RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 WASF2Q9Y6W5 498 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 NUMA1Q14980 2115 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 TRPM6Q9BX84 2022 aa7.71□□□□□ -1.17
TDP1-214ENST00000556063 LRRC72A6NJI9 287 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ERI2A8K979 691 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 E7EVH7 732 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 MUSKO15146 869 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 MID1O15344 667 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 MAP3K13O43283 966 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 NDUFS2O75306 463 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ECEL1O95672 775 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 EPOP01588 193 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 NFKB1P19838 968 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 GKP32189 559 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 FDFT1P37268 417 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 COILP38432 576 aaPredicted RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 CD86P42081 329 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 RGRP47804 291 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 KCNJ1P48048 391 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 LMAN1P49257 510 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 FNTBP49356 437 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 TPMTP51580 245 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 EPHB1P54762 984 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 MPP3Q13368 585 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ANGPT1Q15389 498 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 PPP1R7Q15435 360 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ERAP2Q6P179 960 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ZC3H14Q6PJT7 736 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 SYDE1Q6ZW31 735 aaPredicted RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 ERN2Q76MJ5 926 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 TTC7BQ86TV6 843 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 WDR5BQ86VZ2 330 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 CACUL1Q86Y37 369 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 CAMK1DQ8IU85 385 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.71□□□□□ -1.18
TDP1-214ENST00000556063 ARRDC2Q8TBH0 407 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 CCDC110Q8TBZ0 833 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 PDCD6IPQ8WUM4 868 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 IMP4Q96G21 291 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 SRPK1Q96SB4 655 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 FSD1LQ9BXM9 530 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 HDAC8Q9BY41 377 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 BTBD1Q9H0C5 482 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 GBA3Q9H227 469 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 KCNH6Q9H252 994 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 C10orf88Q9H8K7 445 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 SGK2Q9HBY8 427 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 PCDH9Q9HC56 1237 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 POLR3BQ9NW08 1133 aaPredicted RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 C2orf42Q9NWW7 574 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 ZSCAN32Q9NX65 697 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 SMARCAL1Q9NZC9 954 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 USP36Q9P275 1121 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 FAM153AQ9UHL3 310 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 SARDHQ9UL12 918 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 TPX2Q9ULW0 747 aaKnown RBP7.71□□□□□ -1.18
TDP1-214ENST00000556063 PHTF1Q9UMS5 762 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 RAI2Q9Y5P3 530 aa7.71□□□□□ -1.18
TDP1-214ENST00000556063 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 ABCA7Q8IZY2 2146 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 A0A1W2PP55 124 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 TSPAN11A1L157 253 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 C16orf96A6NNT2 1141 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 UPK3BL1B0FP48 263 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 UPK3BL2E5RIL1 263 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 NEMP1O14524 444 aa7.7□□□□□ -1.18
TDP1-214ENST00000556063 NDC80O14777 642 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms