RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 AIPL1Q9NZN9 384 aa12.86□□□□□ -0.35
HNRNPC-221ENST00000555883 SALL4Q9UJQ4 1053 aa12.86□□□□□ -0.35
HNRNPC-221ENST00000555883 ARID1BQ8NFD5 2236 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 LY6G6EA0A0G2JKS1 128 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 SMTNL1A8MU46 457 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 FFAR2O15552 330 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 AQP9O43315 295 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 CREB3O43889 395 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 TM7SF2O76062 418 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 MT-CO3P00414 261 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 TNFAIP3P21580 790 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 EIF2S3P41091 472 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 PRKCIP41743 596 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 CSNK1DP48730 415 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 TPI1P60174 286 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 OGDHQ02218 1023 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 PDE1CQ14123 709 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 ATXN7L2Q5T6C5 722 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 BRAT1Q6PJG6 821 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 ZNF641Q96N77 438 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 EDEM3Q9BZQ6 932 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 LHX3Q9UBR4 397 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 UBA2Q9UBT2 640 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 IPO11Q9UI26 975 aaKnown RBP12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 GGT7Q9UJ14 662 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 AP4E1Q9UPM8 1137 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 ITM2BQ9Y287 266 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 U3KQA8 63 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 ADAMTS20P59510 1910 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
HNRNPC-221ENST00000555883 CFAP69A5D8W1 941 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TMEM191CA6NGB0 347 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 LRRC53A6NM62 1247 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 OPA1O60313 960 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 DXOO77932 396 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TIMP2P16035 220 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 HCAR3P49019 387 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 PEX5P50542 639 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 THOP1P52888 689 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 CLDN6P56747 220 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 RFTN1Q14699 578 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 CYTH1Q15438 398 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TMEM52BQ4KMG9 183 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 FIGNQ5HY92 759 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 ERMARDQ5T6L9 678 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 AFMIDQ63HM1 303 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 C19orf48Q6RUI8 117 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 LEKR1Q6ZMV7 388 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 MACC1Q6ZN28 852 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 SDR16C5Q8N3Y7 309 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TP53I13Q8NBR0 393 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 CXorf40AQ8TE69 158 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 HNRNPLLQ8WVV9 542 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 SPASTQ9UBP0 616 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 AK5Q9Y6K8 562 aa12.84□□□□□ -0.35
HNRNPC-221ENST00000555883 TRPM6Q9BX84 2022 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 A0A1B0GTH6 734 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 EME2A4GXA9 379 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ARHGAP42A6NI28 874 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 TMEM110-MUSTN1A8MSY1 372 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 RRP8O43159 456 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 TEX33O43247 280 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 RNF8O76064 485 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 MYBL1P10243 752 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 JUNDP17535 347 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 PSMA2P25787 234 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ACTN2P35609 894 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 IGFALSP35858 605 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ABCG1P45844 678 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 NSUN2Q08J23 767 aaKnown RBP eCLIP12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 EIF2B5Q13144 721 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ACAP1Q15027 740 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 UGP2Q16851 508 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ZNF542PQ5EBM4 170 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 TPRG1LQ5T0D9 272 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 IGF2-ASQ6U949 168 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 RFX8Q6ZV50 586 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 LSMEM2Q8N112 164 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 ARFGAP1Q8N6T3 406 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 TPCN2Q8NHX9 752 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 SPOCK2Q92563 424 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 FGF11Q92914 225 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 BOCQ9BWV1 1114 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 SUV39H2Q9H5I1 410 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 TMEM63CQ9P1W3 806 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 APOBEC3BQ9UH17 382 aaKnown RBP12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 KLF15Q9UIH9 416 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 SCINQ9Y6U3 715 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 DOCK9Q9BZ29 2069 aa12.83□□□□□ -0.36
HNRNPC-221ENST00000555883 LMO7DNF2Z398 122 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms