RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 SUN1O94901 812 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 KLF8O95600 359 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-220ENST00000555634 NDST3O95803 873 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 ADH1BP00325 375 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 EGFP01133 1207 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 BMP1P13497 986 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 CD68P34810 354 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-220ENST00000555634 NRLP54845 237 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 SKOR1P84550 965 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 PDE1BQ01064 536 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 CDK18Q07002 472 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 BRD3Q15059 726 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 MYLK3Q32MK0 819 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 SYCP2LQ5T4T6 812 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 ZNF776Q68DI1 518 aaPredicted RBP11.31□□□□□ -0.6
SHMT2-220ENST00000555634 FSTL4Q6MZW2 842 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 ERAP2Q6P179 960 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 EMBQ6PCB8 327 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 BRAT1Q6PJG6 821 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 TXNDC11Q6PKC3 985 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 CCNJLQ8IV13 435 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.31□□□□□ -0.6
SHMT2-220ENST00000555634 PGBD5Q8N414 524 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 LPCAT1Q8NF37 534 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 OR6K2Q8NGY2 324 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 SPATA22Q8NHS9 363 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 FBXO25Q8TCJ0 367 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 ART4Q93070 314 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 LRRC39Q96DD0 335 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 MRGPRX3Q96LB0 322 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 TTC25Q96NG3 672 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 IER2Q9BTL4 223 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
SHMT2-220ENST00000555634 TMEM245Q9H330 911 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 HACD3Q9P035 362 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 MUTYHQ9UIF7 546 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 SLCO3A1Q9UIG8 710 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 NFU1Q9UMS0 254 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 RAI2Q9Y5P3 530 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 ACTL7AQ9Y615 435 aa11.31□□□□□ -0.6
SHMT2-220ENST00000555634 SCN8AQ9UQD0 1980 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 CCDC151A5D8V7 595 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 WASH3PC4AMC7 463 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 K7EQS6 105 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 KPNA3O00505 521 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-220ENST00000555634 ALDH1A2O94788 518 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 CD160O95971 181 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 MT-CYBP00156 380 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-220ENST00000555634 IL1BP01584 269 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 EPOP01588 193 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 UGT2B4P06133 528 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 PAMP19021 973 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 CR2P20023 1033 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 PRKCHP24723 683 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 PHBP35232 272 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 IL12RB1P42701 662 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 MAGEA9P43362 315 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 SUOXP51687 545 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 SEPT6Q14141 434 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 NAIF1Q69YI7 327 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-220ENST00000555634 LRRC8BQ6P9F7 803 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 NCEH1Q6PIU2 408 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 GDPD4Q6W3E5 623 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 DPY19L3Q6ZPD9 716 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 NAT8LQ8N9F0 302 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 OR2A12Q8NGT7 310 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 RPLP0P6Q8NHW5 317 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 ARRDC2Q8TBH0 407 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 HCAR2Q8TDS4 363 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 FRS2Q8WU20 508 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 OXNAD1Q96HP4 312 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-220ENST00000555634 ZNF419Q96HQ0 510 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-220ENST00000555634 SERPINB12Q96P63 405 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 PARD6BQ9BYG5 372 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 IL22Q9GZX6 179 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 TBC1D17Q9HA65 648 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 POLMQ9NP87 494 aaPredicted RBP11.3□□□□□ -0.6
SHMT2-220ENST00000555634 LTB4R2Q9NPC1 389 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 GRHL1Q9NZI5 618 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 SCML1Q9UN30 329 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 ATG2BQ96BY7 2078 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 EYSQ5T1H1 3165 aa11.3□□□□□ -0.6
SHMT2-220ENST00000555634 XIRP2A4UGR9 3374 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 HEATR9A2RTY3 570 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 MUSKO15146 869 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 SIN3BO75182 1162 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 SPAG6O75602 509 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 LEFTY1O75610 366 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 TMEM63AO94886 807 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 PIGNO95427 931 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 CRTAMO95727 393 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 DNTTP04053 509 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ACADMP11310 421 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 CYP2A6P11509 494 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ALADP13716 330 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 HLA-EP13747 358 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 ITGB7P26010 798 aa11.29□□□□□ -0.6
SHMT2-220ENST00000555634 KIR2DL1P43626 348 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-220ENST00000555634 RGRP47804 291 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms