RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PIP5KL1Q5T9C9 394 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 N4BP2L1Q5TBK1 243 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 AADACL2Q6P093 401 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 BBS12Q6ZW61 710 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 TRIM69Q86WT6 500 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 TTC13Q8NBP0 860 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 CHST14Q8NCH0 376 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 DEFB124Q8NES8 71 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 TMIEQ8NEW7 156 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 OR14C36Q8NHC7 312 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 ISG20Q96AZ6 181 aaKnown RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 MS4A14Q96JA4 679 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 SLC6A18Q96N87 628 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 TNKS2Q9H2K2 1166 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 NOL6Q9H6R4 1146 aaKnown RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 EBF2Q9HAK2 575 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 PREBQ9HCU5 417 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 HOMER3Q9NSC5 361 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 FNDC3AQ9Y2H6 1198 aaKnown RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 FARP1Q9Y4F1 1045 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 WASF2Q9Y6W5 498 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 KMT2BQ9UMN6 2715 aaPredicted RBP9.78□□□□□ -0.84
ACTN1-215ENST00000555616 ACACBO00763 2458 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 GON4LQ3T8J9 2241 aa9.78□□□□□ -0.84
ACTN1-215ENST00000555616 EPG5Q9HCE0 2579 aa9.77□□□□□ -0.84
ACTN1-215ENST00000555616 DOCK4Q8N1I0 1966 aa9.77□□□□□ -0.84
ACTN1-215ENST00000555616 CTAGE15A4D2H0 777 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 ZSCAN5CA6NGD5 496 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CCDC188H7C350 402 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 PLK4O00444 970 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 VILLO15195 856 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 BNIP3LO60238 219 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CST8O60676 142 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 SLU7O95391 586 aaKnown RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CTAGE8P0CG41 777 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 TGM2P21980 687 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 IL4RP24394 825 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 SERPINB6P35237 376 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 NUDT1P36639 197 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CTSKP43235 329 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 RECQLP46063 649 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 NR2C2P49116 596 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CSNK1EP49674 416 aaKnown RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CCNHP51946 323 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 YBEYP58557 167 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 TAS2R38P59533 333 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 DYNLT1P63172 113 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 KLF1Q13351 362 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 DPYSQ14117 519 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 POLD3Q15054 466 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 LLGL1Q15334 1064 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 KIF19Q2TAC6 998 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 HLA-BQ31612 363 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 POM121L1PQ3SYA9 428 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 PARP15Q460N3 678 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 SLC9A4Q6AI14 798 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 LAYNQ6UX15 382 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 DPY19L3Q6ZPD9 716 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 ZNF572Q7Z3I7 529 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CTAGE6Q86UF2 777 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 CTAGE4Q8IX94 777 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 UMODL1-AS1Q8N2C9 162 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 PCDH19Q8TAB3 1148 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 GRIN3AQ8TCU5 1115 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 P3H4Q92791 437 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 ARRDC3Q96B67 414 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 PPP1R16AQ96I34 528 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 HDAC8Q9BY41 377 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 FRMD8P1Q9BZ68 369 aaPredicted RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 SLC32A1Q9H598 525 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 IL36AQ9UHA7 158 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 ANKRD6Q9Y2G4 727 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 FCF1Q9Y324 198 aaKnown RBP9.77□□□□□ -0.85
ACTN1-215ENST00000555616 PCDHGB2Q9Y5G2 931 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 NUMA1Q14980 2115 aa9.77□□□□□ -0.85
ACTN1-215ENST00000555616 APOC4-APOC2K7ER74 178 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 RNF103O00237 685 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 KPNA3O00505 521 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-215ENST00000555616 KDELR3O43731 214 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 GSRP00390 522 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 APOC2P02655 101 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 ERCC2P18074 760 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 AMPD1P23109 780 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 ITGB7P26010 798 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 SHC2P98077 582 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 CCDC15Q0P6D6 951 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 SERINC3Q13530 473 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 HNRNPDQ14103 355 aaKnown RBP9.76□□□□□ -0.85
ACTN1-215ENST00000555616 ZNF423Q2M1K9 1284 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 CARD16Q5EG05 197 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 NAPEPLDQ6IQ20 393 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 NEK5Q6P3R8 708 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 ERN2Q76MJ5 926 aaKnown RBP9.76□□□□□ -0.85
ACTN1-215ENST00000555616 BZW1Q7L1Q6 419 aaKnown RBP9.76□□□□□ -0.85
ACTN1-215ENST00000555616 ADAT2Q7Z6V5 191 aaKnown RBP9.76□□□□□ -0.85
ACTN1-215ENST00000555616 NAXDQ8IW45 347 aa9.76□□□□□ -0.85
ACTN1-215ENST00000555616 LZTR1Q8N653 840 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms